RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 EIF4E2O60573 245 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 NUDT7P0C024 238 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 UBL4AP11441 157 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 DRD4P21917 467 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 PTGER4P35408 488 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ADH7P40394 386 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 SUMO3P55854 103 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 NUP107P57740 925 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 FADDQ13158 208 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 PLPPR5Q32ZL2 321 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ACSF3Q4G176 576 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ENPP6Q6UWR7 440 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 SPATA21Q7Z572 469 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 HMGN2P46Q86SG4 172 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 MRGPRGQ86SM5 289 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF808Q8N4W9 903 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 SLC38A5Q8WUX1 472 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 NPAS1Q99742 590 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ELAC2Q9BQ52 826 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 PIGQQ9BRB3 760 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 CPPED1Q9BRF8 314 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 TTYH2Q9BSA4 534 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 QRSL1Q9H0R6 528 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 IKZF5Q9H5V7 419 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 THUMPD1Q9NXG2 353 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 VDAC3Q9Y277 283 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 FLNBO75369 2602 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 PCNX1Q96RV3 2341 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 AGAP5A6NIR3 686 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 FBP2O00757 339 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF264O43296 627 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 BCAS1O75363 584 aaPredicted RBP20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 GLI4P10075 376 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 RPS4Y1P22090 263 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 PPIBP23284 216 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 ADSLP30566 484 aaPredicted RBP20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 P2RX1P51575 399 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 SMSP52788 366 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 CLDN18P56856 261 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 GNGT1P63211 74 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 PMPCAQ10713 525 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 FGFBP1Q14512 234 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 B3GNT6Q6ZMB0 384 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 DHDDSQ86SQ9 333 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 C10orf111Q8N326 155 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 LAT2Q9GZY6 243 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 MTHFD2LQ9H903 347 aaPredicted RBP20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 A4GALTQ9NPC4 353 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF337Q9Y3M9 751 aa20.55■□□□□ 0.88
SFSWAP-204ENST00000535399 C7orf72A4D263 438 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 GMNCA6NCL1 334 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 KDM4EB2RXH2 506 aaPredicted RBP20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 CLDN1O95832 211 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 CSTAP01040 98 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 BCHEP06276 602 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 LINGO3P0C6S8 592 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF708P17019 499 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 PGM1P36871 562 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 PLAURQ03405 335 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 SKP2Q13309 424 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 BCL2A1Q16548 175 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 RUNDC3AQ59EK9 446 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 SEM1Q6ZVN7 128 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 EIF3MQ7L2H7 374 aaKnown RBP20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 GTPBP8Q8N3Z3 284 aaPredicted RBP20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 FAM71CQ8NEG0 241 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 OR5W2Q8NH69 310 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 POC1BQ8TC44 478 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 GPR119Q8TDV5 335 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 PMM1Q92871 262 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF524Q96C55 264 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 ARSGQ96EG1 525 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 TMEM19Q96HH6 336 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 CGREF1Q99674 301 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 CALML5Q9NZT1 146 aa20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 ASH1LQ9NR48 2969 aaKnown RBP20.54■□□□□ 0.88
SFSWAP-204ENST00000535399 DSPPQ9NZW4 1301 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 ICE1Q9Y2F5 2266 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 A1L4Q6 167 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 CLDN24A6NM45 220 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 LINC01387J3KSC0 135 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 DNAJA2O60884 412 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF17P17021 662 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 GPX2P18283 190 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 POU3F2P20265 443 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 AGAP20933 346 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 PSMA4P25789 261 aaKnown RBP20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 ZNF41P51814 821 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 CRISP3P54108 245 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 SRYQ05066 204 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 NFYCQ13952 458 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 XKRXQ6PP77 449 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 TOR1AIP2Q8NFQ8 470 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 ZPLD1Q8TCW7 415 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 RND1Q92730 232 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 MAL2Q969L2 176 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 ZBTB8AQ96BR9 441 aa20.53■□□□□ 0.88
SFSWAP-204ENST00000535399 TREX2Q9BQ50 279 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms