RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DCAF7P61962 342 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 LASP1Q14847 261 aaKnown RBP11.36□□□□□ -0.59
SCARB1-204ENST00000535005 EBPQ15125 230 aaKnown RBP11.36□□□□□ -0.59
SCARB1-204ENST00000535005 BTBD16Q32M84 506 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 HSDL2Q6YN16 418 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 SZRD1Q7Z422 152 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 ZBTB46Q86UZ6 589 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 CALHM3Q86XJ0 350 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 RNF130Q86XS8 419 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 C9orf40Q8IXQ3 194 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 LGI4Q8N135 537 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 C17orf47Q8NEP4 570 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 NUBPLQ8TB37 319 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 FER1L6-AS2Q96M78 137 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 SPATA9Q9BWV2 254 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
SCARB1-204ENST00000535005 GPR55Q9Y2T6 319 aaPredicted RBP11.36□□□□□ -0.59
SCARB1-204ENST00000535005 PCDHGA10Q9Y5H3 936 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 PMF1-BGLAPU3KQ54 211 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PNMA8CA0A1B0GUJ8 204 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 FAM220BPB1ANY3 271 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 NKX2-8O15522 239 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 RGS10O43665 173 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 TNFRSF21O75509 655 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 AGR2O95994 175 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 MT-ND1P03886 318 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SERPINA7P05543 415 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 DRD5P21918 477 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PIGAP37287 484 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 KHKP50053 298 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 GZMMP51124 257 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ARPC4P59998 168 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 RNF4P78317 190 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 DCAF10Q5QP82 559 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 COX20Q5RI15 118 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.595e-7■■■■□ 22.8
SCARB1-204ENST00000535005 UBE2UQ5VVX9 321 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SHQ1Q6PI26 577 aaKnown RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SLC29A4Q7RTT9 530 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SERPINA11Q86U17 422 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 AMER2Q8N7J2 671 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF441Q8N8Z8 693 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SLC16A11Q8NCK7 471 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 OR5L2Q8NGL0 311 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ADIPOR1Q96A54 375 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 TP53INP1Q96A56 240 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF583Q96ND8 569 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 STACQ99469 402 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 TRIM8Q9BZR9 551 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CCDC90BQ9GZT6 254 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PIGUQ9H490 435 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SMURF2Q9HAU4 748 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 DUSP22Q9NRW4 184 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 THUMPD1Q9NXG2 353 aaKnown RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 IGF2RP11717 2491 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 TRBV11-1A0A0K0K1C0 115 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ELOVL7A1L3X0 281 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 AGAP5A6NIR3 686 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 HMGN4O00479 90 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 RRP8O43159 456 aaKnown RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 HS6ST1O60243 411 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 KRT8P05787 483 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CT45A8P0DMV1 189 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CT45A9P0DMV2 189 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ACP2P11117 423 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ETV6P41212 452 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CASP3P42574 277 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CRATP43155 626 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SOX8P57073 446 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 RPS26P62854 115 aaKnown RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PSPHP78330 225 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PSG6Q00889 435 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF155Q12901 538 aaPredicted RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CHAF1BQ13112 559 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZNHIT3Q15649 155 aaPredicted RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 NPTX1Q15818 432 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 CT45A2Q5DJT8 189 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 H3F3CQ6NXT2 135 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 JMJD6Q6NYC1 403 aaPredicted RBP11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ANGPTL8Q6UXH0 198 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 C10orf111Q8N326 155 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 HORMAD2Q8N7B1 307 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZSCAN1Q8NBB4 408 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 KBTBD8Q8NFY9 601 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ADAMTS15Q8TE58 950 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 PROX1Q92786 737 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SLC38A4Q969I6 547 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 LGALS12Q96DT0 336 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ZHX1-C8orf76Q96EF9 292 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 SLC35A4Q96G79 324 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 OR7D2Q96RA2 312 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 ITPAQ9BY32 194 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
SCARB1-204ENST00000535005 WWTR1Q9GZV5 400 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms