RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	FGD3	Q5JSP0	725 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	TMEM184A	Q6ZMB5	413 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	KIF6	Q6ZMV9	814 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	KATNAL2	Q8IYT4	538 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SLC38A6	Q8IZM9	456 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	LINC00469	Q8N7U9	141 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	RELL2	Q8NC24	303 aa	Predicted RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	C8orf46	Q8TAG6	207 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	M1AP	Q8TC57	530 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ACMSD	Q8TDX5	336 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	TSEN15	Q8WW01	171 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	NSL1	Q96IY1	281 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	IFT74	Q96LB3	600 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	AMDHD1	Q96NU7	426 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	RPRD1A	Q96P16	312 aa	Predicted RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	BPIFA3	Q9BQP9	254 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	BARHL1	Q9BZE3	327 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	RHOJ	Q9H4E5	214 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	TMEM185B	Q9H7F4	350 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	MCCC2	Q9HCC0	563 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	POLD4	Q9HCU8	107 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	FAM120C	Q9NX05	1096 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SLC2A8	Q9NY64	477 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	GPR83	Q9NYM4	423 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	HACD3	Q9P035	362 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	LCMT1	Q9UIC8	334 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ZNF639	Q9UID6	485 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	IKZF3	Q9UKT9	509 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	CA5B	Q9Y2D0	317 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	FKBP7	Q9Y680	259 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ZHX2	Q9Y6X8	837 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	PARP4	Q9UKK3	1724 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979		A0A1W2PP64	1363 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ARID2	Q68CP9	1835 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	SBF2	Q86WG5	1849 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	COL5A2	P05997	1499 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	BTBD17	A6NE02	478 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	FBLL1	A6NHQ2	334 aa	Known RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	ACOD1	A6NK06	481 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	SNURFL	B1AK76	121 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	SUPT3H	B4E1H0	165 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	IMPA2	O14732	288 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	DUX1	O43812	170 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	DFNA5	O60443	496 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	TPST2	O60704	377 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	CTSV	O60911	334 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	NXPH2	O95156	264 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	PGK1	P00558	417 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	NPPA	P01160	153 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	OPN1LW	P04000	364 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	S100A6	P06703	90 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	CRYGB	P07316	175 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	UBTFL6	P0CB48	400 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	MBL2	P11226	248 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	NCK1	P16333	377 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	EPHX2	P34913	555 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	NUP62	P37198	522 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	FDFT1	P37268	417 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	DCT	P40126	519 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	CASP4	P49662	377 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	TPMT	P51580	245 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	ATP12A	P54707	1039 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	ERVK11-1	P61568	191 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	LIPE	Q05469	1076 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	ZP4	Q12836	540 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	TFDP1	Q14186	410 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	MESD	Q14696	234 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	TAF13	Q15543	124 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	GGTA1P	Q4G0N0	100 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	XKR7	Q5GH72	579 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	DCAF12	Q5T6F0	453 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	C1orf189	Q5VU69	101 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	STEAP1B	Q6NZ63	245 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	NET1	Q7Z628	596 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	KIAA1328	Q86T90	577 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	RANBP3L	Q86VV4	465 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	SLC7A5P1	Q8MH63	180 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	FAM89B	Q8N5H3	189 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	SLC37A3	Q8NCC5	494 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	OR4D5	Q8NGN0	318 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	SCFD1	Q8WVM8	642 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	MRPL24	Q96A35	216 aa	Known RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	UPRT	Q96BW1	309 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	HAVCR1	Q96D42	359 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	PELI1	Q96FA3	418 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	STRADB	Q9C0K7	418 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	VCX3B	Q9H321	246 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	TDRD3	Q9H7E2	651 aa	Known RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	MED17	Q9NVC6	651 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	GNG12	Q9UBI6	72 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	PEF1	Q9UBV8	284 aa	Known RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	ELF5	Q9UKW6	265 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	POMT2	Q9UKY4	750 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	FAF1	Q9UNN5	650 aa	Predicted RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	WIPI2	Q9Y4P8	454 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	BCL9	O00512	1426 aa		4	□□□□□ -1.77
ATM-223	ENST00000533979	EDC4	Q6P2E9	1401 aa	Known RBP	4	□□□□□ -1.77
ATM-223	ENST00000533979	KTN1	Q86UP2	1357 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms