RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PXDC1Q5TGL8 231 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 KIAA0907Q7Z7F0 614 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ADGRA1Q86SQ6 560 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 BRIX1Q8TDN6 353 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HAVCR2Q8TDQ0 301 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SHC3Q92529 594 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ESAMQ96AP7 390 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF514Q96K75 400 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 IL12RB2Q99665 862 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 NKX6-2Q9C056 277 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ACTL8Q9H568 366 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LMAN1LQ9HAT1 526 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 KCNK13Q9HB14 408 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 KLHL21Q9UJP4 597 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HRH3Q9Y5N1 445 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CPQQ9Y646 472 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PRSS51A0A1B0GVH4 220 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TCRBV5S4A2TA0A5A2 114 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM235A6NFC5 223 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 HELTA6NFD8 242 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 A8MUA0 341 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 GRXCR1A8MXD5 290 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 M0R2Z0 102 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ERI3O43414 337 aaKnown RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PRICKLE3O43900 615 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 LILRB3O75022 631 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RECQL4O94761 1208 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CBLP22681 906 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ACKR3P25106 362 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 GCGRP47871 477 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 HCCSP53701 268 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 FOXK1P85037 733 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CDK5Q00535 292 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF572Q7Z3I7 529 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SLC51BQ86UW2 128 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 IGFN1Q86VF2 1251 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 MON1AQ86VX9 555 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF547Q8IVP9 402 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ADGRF3Q8IZF5 1079 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 IL17RDQ8NFM7 739 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CMASQ8NFW8 434 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 WDR20Q8TBZ3 569 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 M1APQ8TC57 530 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RADILQ96JH8 1075 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 BTN2A3PQ96KV6 586 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 VAMP8Q9BV40 100 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SOX17Q9H6I2 414 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RDH14Q9HBH5 336 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TM7SF3Q9NS93 570 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 KCTD3Q9Y597 815 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 USP54Q70EL1 1684 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 A0A0B4J2A0 478 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OR2C1O95371 312 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 EIF4EP06730 217 aaKnown RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 GLULP15104 373 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RAB5AP20339 215 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 FGF7P21781 194 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 NDUFS1P28331 727 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CALCRP30988 508 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OPRL1P41146 370 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RPS5P46782 204 aaKnown RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PPP2CBP62714 309 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF92Q03936 586 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 C9orf50Q5SZB4 431 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SLC18B1Q6NT16 456 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 H3F3CQ6NXT2 135 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OGFOD3Q6PK18 319 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PRSS48Q7RTY5 328 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 C6orf120Q7Z4R8 191 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 LRRC28Q86X40 367 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OR2M7Q8NG81 312 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ALG3Q92685 438 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PRRC1Q96M27 445 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PIP5K1AQ99755 562 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 FKRPQ9H9S5 495 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PLEKHJ1Q9NW61 149 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TEX50A0A1B0GTY4 177 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 C11orf98E9PRG8 122 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 MEIS2O14770 477 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 MPIG6BO95866 241 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 KLK1P06870 262 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 RHOQP17081 205 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 VIPR1P32241 457 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 FOXN2P32314 431 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ADRA1BP35368 520 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CXADRP78310 365 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ADARB1P78563 741 aaKnown RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 MELKQ14680 651 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TESK1Q15569 626 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TEX261Q6UWH6 196 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM173Q86WV6 379 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OR2T11Q8NH01 316 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 OR5AK2Q8NH90 309 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms