RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FNDC8Q8TC99 324 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GPR148Q8TDV2 347 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MAFIPQ8WZ33 124 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SNAPC3Q92966 411 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SLC46A2Q9BY10 475 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 THSD1Q9NS62 852 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAIMQ9NVQ4 179 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SAGE1Q9NXZ1 904 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TAAR2Q9P1P5 351 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 EMCNQ9ULC0 261 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CARD8Q9Y2G2 431 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GPR45Q9Y5Y3 372 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TRAV18A0A075B6X5 111 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SC5DO75845 299 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 IGHEP01854 428 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CDK1P06493 297 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TNFSF4P23510 183 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 AHRP35869 848 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MAGEA3P43357 314 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PRKXP51817 358 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PPP5CP53041 499 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GARNL3Q5VVW2 1013 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM198BQ6UWH4 519 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SLC16A9Q7RTY1 509 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CCDC28AQ8IWP9 274 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MRPL43Q8N983 215 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 UBTD2Q8WUN7 234 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GCDHQ92947 438 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MS4A4AQ96JQ5 239 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TMEM246Q9BRR3 403 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SYT11Q9BT88 431 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 AGPAT4Q9NRZ5 378 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 OR6C2Q9NZP2 312 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 DNMT3BQ9UBC3 853 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 C12orf71A8MTZ7 269 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 UPK1BO75841 260 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 RPS5P46782 204 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 HACD4Q5VWC8 232 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 GDPGP1Q6ZNW5 385 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 COMMD7Q86VX2 200 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 VRK2Q86Y07 508 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 B3GNT7Q8NFL0 401 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 OR14A16Q8NHC5 309 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 GIMAP5Q96F15 307 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 FAM71F1Q96KD3 344 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 PLEKHA3Q9HB20 300 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 VDAC3Q9Y277 283 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 MYH8P13535 1937 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 NRAPQ86VF7 1730 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 LYRM1O43325 122 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 GJB3O75712 270 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 ETV4P43268 484 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 ALDH3B2P48448 385 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 POLR2HP52434 150 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 TAP2Q03519 686 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 EXOSC7Q15024 291 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 PLGLAQ15195 96 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 PLCXD3Q63HM9 321 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 CCBE1Q6UXH8 406 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 GPR149Q86SP6 731 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 GLYATL2Q8WU03 294 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 ASB17Q8WXJ9 295 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 FGF13Q92913 245 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 RRNAD1Q96FB5 475 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 SLC6A16Q9GZN6 736 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 SAP130Q9H0E3 1048 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 ARL6Q9H0F7 186 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 TSPAN10Q9H1Z9 355 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 SYNPO2LQ9H987 977 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 PLEKHJ1Q9NW61 149 aa7.96□□□□□ -1.13
CTNND1-227ENST00000530748 TESQ9UGI8 421 aaKnown RBP7.96□□□□□ -1.13
CTNND1-227ENST00000530748 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-227ENST00000530748 SERPINA5P05154 406 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 AKR1C2P52895 323 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 CTSCP53634 463 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 RBPJQ06330 500 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 SBSNQ6UWP8 590 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 LANCL3Q6ZV70 420 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 B3GNT8Q7Z7M8 397 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 SLC15A4Q8N697 577 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 BPIFA2Q96DR5 249 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 VRK1Q99986 396 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-227ENST00000530748 OR2T1O43869 369 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 PTHP01270 115 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 ZNF14P17017 642 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-227ENST00000530748 PRSS3P35030 304 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 MS4A2Q01362 244 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 TNFRSF17Q02223 184 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 METTL11BQ5VVY1 283 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 WDR53Q7Z5U6 358 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-227ENST00000530748 TECPR1Q7Z6L1 1165 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 CMTM1Q8IZ96 169 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
CTNND1-227ENST00000530748 ASB11Q8WXH4 323 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 SLA2Q9H6Q3 261 aa7.96□□□□□ -1.14
CTNND1-227ENST00000530748 CUTCQ9NTM9 273 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms