RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	RHBDD1	Q8TEB9	315 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	FBLIM1	Q8WUP2	373 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	TMEM239	Q8WW34	195 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	HIST1H2AC	Q93077	130 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	C16orf58	Q96GQ5	468 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	SENP5	Q96HI0	755 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	CCDC74B	Q96LY2	380 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	IP6K3	Q96PC2	410 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	OR6C1	Q96RD1	312 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	MBOAT4	Q96T53	435 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	KRTAP4-12	Q9BQ66	201 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	COPS4	Q9BT78	406 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	POLDIP3	Q9BY77	421 aa	Known RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	TBL1XR1	Q9BZK7	514 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	B3GNT4	Q9C0J1	378 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	OR8D2	Q9GZM6	311 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	SPRTN	Q9H040	489 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	FN3K	Q9H479	309 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	SLC25A19	Q9HC21	320 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	TIMMDC1	Q9NPL8	285 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	TBC1D23	Q9NUY8	699 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	RABL2B	Q9UNT1	228 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	ERVK-11	Q9UQG0	969 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	PCDHGB7	Q9Y5F8	929 aa		5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	SPIN1	Q9Y657	262 aa	Predicted RBP	5.8	□□□□□ -1.48
PABPC4-222	ENST00000527718	IGHV5-10-1	A0A0J9YXX1	117 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SAGE2P	A6NJ88	616 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ELOA3D	A6NLF2	546 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CPSF4L	A6NMK7	179 aa	Known RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	RIIAD1	A6NNX1	92 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZNF99	A8MXY4	864 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PTGES3L	E9PB15	166 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	FAM227A	F5H4B4	570 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718		M0R3H8	397 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	DLGAP1	O14490	977 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TP53I11	O14683	189 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	MYL12B	O14950	172 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZNF264	O43296	627 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	HCRTR1	O43613	425 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CDC40	O60508	579 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ALOX12B	O75342	701 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TRIM3	O75382	744 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	REM1	O75628	298 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CDC123	O75794	336 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZFAND5	O76080	213 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	OR6B1	O95007	311 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	GAST	P01350	101 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	GNAO1	P09471	354 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZGLP1	P0C6A0	271 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SAG	P10523	405 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CYP4B1	P13584	511 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	FOLR1	P15328	257 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZNF3	P17036	446 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CCNA2	P20248	432 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TBXA2R	P21731	343 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CHM	P24386	653 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	DCK	P27707	260 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	NOS3	P29474	1203 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SLC6A6	P31641	620 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CCKBR	P32239	447 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	MAP3K8	P41279	467 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	RANBP1	P43487	201 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	YAP1	P46937	504 aa	Known RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	RFX3	P48380	749 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ALDH3B2	P48448	385 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PCYT1A	P49585	367 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	EMD	P50402	254 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SLC26A5	P58743	744 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TUBA1B	P68363	451 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CCL7	P80098	99 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	MC2R	Q01718	297 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	BNC1	Q01954	994 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CD47	Q08722	323 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	DMWD	Q09019	674 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	RAB40B	Q12829	278 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PIN1	Q13526	163 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	RAPSN	Q13702	412 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	CBFB	Q13951	182 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	FGFBP1	Q14512	234 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	NCF4	Q15080	339 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PTGES3	Q15185	160 aa	Known RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TBCE	Q15813	527 aa	Predicted RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SNAPC1	Q16533	368 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	OCLN	Q16625	522 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PRSS53	Q2L4Q9	553 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZNF750	Q32MQ0	723 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ELOA3B	Q3SY89	546 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ALG10B	Q5I7T1	473 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	EXOSC6	Q5RKV6	272 aa	Known RBP	5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	LCN1P1	Q5VSP4	162 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	SLX4IP	Q5VYV7	408 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	PGBD2	Q6P3X8	592 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ARHGAP11A	Q6P4F7	1023 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	GUSBP11	Q6P575	273 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TBPL2	Q6SJ96	375 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	ZNF836	Q6ZNA1	936 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	LINC00299	Q6ZSB3	139 aa		5.79	□□□□□ -1.48
PABPC4-222	ENST00000527718	TUBA1A	Q71U36	451 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms