RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SLCO1B3Q9NPD5 702 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 SDR39U1Q9NRG7 319 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 FOXD3Q9UJU5 478 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 GTPBP1O00178 669 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 SEC14L5O43304 696 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 TGM6O95932 706 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 GUSBP08236 651 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 PEX19P40855 299 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 KHKP50053 298 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 AGFG1P52594 562 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 SUMO3P55854 103 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 DLX5P56178 289 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 CLDN20P56880 219 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 RPS3AP61247 264 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 TNFAIP8L2Q6P589 184 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 P4HA3Q7Z4N8 544 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 SMPDL3BQ92485 455 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 RNASE6Q93091 150 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 INTS12Q96CB8 462 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF350Q9GZX5 532 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 INTS9Q9NV88 658 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 KCNN3Q9UGI6 736 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 CARD8Q9Y2G2 431 aa23.76■■□□□ 1.39
TSPAN4-217ENST00000527644 FBN2P35556 2912 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 SLC22A20A6NK97 555 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 H0YC42 278 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 FCMRO60667 390 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 P2RX1P51575 399 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 TPD52P55327 224 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 TXNL4AP83876 142 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 FOXF2Q12947 444 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 GPR68Q15743 365 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF141Q15928 474 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 AP1ARQ63HQ0 302 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 CBLN3Q6UW01 205 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF621Q6ZSS3 439 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 METTL25Q8N6Q8 603 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF614Q8N883 585 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 RAB8BQ92930 207 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 INPP5KQ9BT40 448 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 POLE3Q9NRF9 147 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 MKLN1Q9UL63 735 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 ICAM5Q9UMF0 924 aa23.75■■□□□ 1.39
TSPAN4-217ENST00000527644 EIF4E2O60573 245 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 LINGO3P0C6S8 592 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 PSMA4P25789 261 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 UQCRC1P31930 480 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 EIF1P41567 113 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 CDKN2CP42773 168 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 PDZK1Q5T2W1 519 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 OR2A2Q6IF42 318 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 MIER2Q8N344 545 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 OIT3Q8WWZ8 545 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 RNF145Q96MT1 663 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 KLHDC3Q9BQ90 382 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 PINK1Q9BXM7 581 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 JKAMPQ9P055 326 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 L3MBTL1Q9Y468 752 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF175Q9Y473 711 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 CREBBPQ92793 2442 aa23.74■■□□□ 1.39
TSPAN4-217ENST00000527644 SERINC4A6NH21 518 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 RFXANKO14593 260 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 POLR3GO15318 223 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 OIP5O43482 229 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 CRHP06850 196 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 RNF144AP50876 292 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 ANXA11P50995 505 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 RAC1P63000 192 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 TLE4Q04727 773 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 GGNQ86UU5 652 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 RNF130Q86XS8 419 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 MED12LQ86YW9 2145 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 GCNT2Q8N0V5 402 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 POC1BQ8TC44 478 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 ROPN1LQ96C74 230 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 NPAS1Q99742 590 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 MCCC2Q9HCC0 563 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 TCF7L2Q9NQB0 619 aa23.73■■□□□ 1.39
TSPAN4-217ENST00000527644 EEF1E1-BLOC1S5C9J1V9 151 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 ZNF264O43296 627 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 EEF1E1O43324 174 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 KIAA0513O60268 411 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 UGT2B17O75795 530 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 NUDT14O95848 222 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 GSNP06396 782 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 UBL4AP11441 157 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 POLR2JP52435 117 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 MSANTD1Q6ZTZ1 278 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 GPR119Q8TDV5 335 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 FIG4Q92562 907 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 SAP130Q9H0E3 1048 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 PIGMQ9H3S5 423 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 RMND5AQ9H871 391 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 KCNE5Q9UJ90 142 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 WDR45Q9Y484 360 aa23.72■■□□□ 1.39
TSPAN4-217ENST00000527644 HMGN4O00479 90 aa23.71■■□□□ 1.39
TSPAN4-217ENST00000527644 EIF1AYO14602 144 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-217ENST00000527644 SASH3O75995 380 aa23.71■■□□□ 1.39
TSPAN4-217ENST00000527644 ME2P23368 584 aa23.71■■□□□ 1.39
TSPAN4-217ENST00000527644 ADH6P28332 368 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms