RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 SLC44A2Q8IWA5 706 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 KIRREL3Q8IZU9 778 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 METTL4Q8N3J2 472 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF675Q8TD23 568 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF75CPQ92670 426 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 KAT2AQ92830 837 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 C11orf24Q96F05 449 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF681Q96N22 645 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 TNFRSF13CQ96RJ3 184 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 HBEGFQ99075 208 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ESRP2Q9H6T0 727 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 PFDN4Q9NQP4 134 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 INTS9Q9NV88 658 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 SIRT5Q9NXA8 310 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 VPS29Q9UBQ0 182 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 LPAR3Q9UBY5 353 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 AP4B1Q9Y6B7 739 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 TMEM233B4DJY2 109 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 FADS1O60427 444 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 GUCY1B2O75343 617 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 HSPA4LO95757 839 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 PRPH2P23942 346 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 AGTR1P30556 359 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 NUDT6P53370 316 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 VLDLRP98155 873 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 RUNX1T1Q06455 604 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 TAB1Q15750 504 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 XKR7Q5GH72 579 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 GALNT18Q6P9A2 607 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 FIGNL1Q6PIW4 674 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 Q6ZSR9 355 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 DTX2Q86UW9 622 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF781Q8N8C0 355 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 STEAP2Q8NFT2 490 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 OR10H5Q8NGA6 315 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 OR10D3Q8NH80 312 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 TWIST2Q8WVJ9 160 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 TM4SF18Q96CE8 201 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 METTL2AQ96IZ6 378 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 CCT7Q99832 543 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 PTGES2Q9H7Z7 377 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 AHSPQ9NZD4 102 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 PSME2Q9UL46 239 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 SLC12A4Q9UP95 1085 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 B3GALT5Q9Y2C3 310 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 OR10H1Q9Y4A9 318 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
CCDC90B-205ENST00000525916 SLC28A1O00337 649 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 GCM2O75603 506 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 BCAS2O75934 225 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 RSL1D1O76021 490 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 NTN1O95631 604 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 CHEK2O96017 543 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 OPN1LWP04000 364 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 SRD5A1P18405 259 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 THBS2P35442 1172 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 NRF1Q16656 503 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 MFSD12Q6NUT3 480 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 CCDC116Q8IYX3 515 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 ARFGAP2Q8N6H7 521 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 DUSP19Q8WTR2 217 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 ROBO4Q8WZ75 1007 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 SDHAF3Q9NRP4 125 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 FBXO34Q9NWN3 711 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 UTS2RQ9UKP6 389 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 MCTS1Q9ULC4 181 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
CCDC90B-205ENST00000525916 DPRXA6NFQ7 191 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 PIP5K1BO14986 540 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 RGS14O43566 566 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 CXCL13O43927 109 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 RAMP1O60894 148 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 SYNGR4O95473 234 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 IGHV4-31P0DP07 118 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 IL32P24001 234 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 IGFBP5P24593 272 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 ADH6P28332 368 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 C21orf58P58505 322 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 RAE1P78406 368 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 IRX1P78414 480 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 PSG6Q00889 435 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 TMEM44Q2T9K0 475 aa11.1□□□□□ -0.63
CCDC90B-205ENST00000525916 GLYR1Q49A26 553 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms