RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RAMP1O60894 148 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 SEC22BO75396 215 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 GSTA1P08263 222 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 EFNA1P20827 205 aaPredicted RBP23.03■■□□□ 1.28
PVT1-219ENST00000523427 CD226Q15762 336 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 DUSP5Q16690 384 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 TSPYL1Q9H0U9 437 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 RRAGDQ9NQL2 400 aaPredicted RBP23.03■■□□□ 1.28
PVT1-219ENST00000523427 UBQLN4Q9NRR5 601 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 WBP11Q9Y2W2 641 aaKnown RBP23.03■■□□□ 1.28
PVT1-219ENST00000523427 FREM1Q5H8C1 2179 aa23.03■■□□□ 1.28
PVT1-219ENST00000523427 NBEAL1Q6ZS30 2694 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 IGHV3-15A0A0B4J1V0 119 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 NGFRP08138 427 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 MAP3K8P41279 467 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 MANFP55145 182 aaKnown RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 C21orf58P58505 322 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 RNPS1Q15287 305 aaKnown RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 TMEM176BQ3YBM2 270 aaPredicted RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 ZNF385BQ569K4 471 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 IKBIPQ70UQ0 350 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 FCRLAQ7L513 359 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 BHLHA15Q7RTS1 189 aaPredicted RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 COX18Q8N8Q8 333 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 OR6Y1Q8NGX8 325 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 OR2W6PQ8NHA6 318 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 FAM76AQ8TAV0 307 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 PIWIL2Q8TC59 973 aaKnown RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 HHATLQ9HCP6 504 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 CISD1Q9NZ45 108 aaKnown RBP23.02■■□□□ 1.28
PVT1-219ENST00000523427 SH3BP4Q9P0V3 963 aa23.02■■□□□ 1.28
PVT1-219ENST00000523427 C9JVG2 144 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 EFNA2O43921 213 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 LYZL6O75951 148 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 RSL1D1O76021 490 aaKnown RBP23.01■■□□□ 1.27
PVT1-219ENST00000523427 PRKD3O94806 890 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 FESP07332 822 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 ALOX5P09917 674 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 LINGO3P0C6S8 592 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 TIFABQ6ZNK6 161 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.01■■□□□ 1.27
PVT1-219ENST00000523427 FBXO27Q8NI29 283 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 PHOSPHO1Q8TCT1 267 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 CPNE4Q96A23 557 aaPredicted RBP23.01■■□□□ 1.27
PVT1-219ENST00000523427 ZNF775Q96BV0 537 aaPredicted RBP23.01■■□□□ 1.27
PVT1-219ENST00000523427 TRAF4Q9BUZ4 470 aaPredicted RBP23.01■■□□□ 1.27
PVT1-219ENST00000523427 GIN1Q9NXP7 522 aa23.01■■□□□ 1.27
PVT1-219ENST00000523427 GIMAP1-GIMAP5A0A087WTJ2 511 aa23■■□□□ 1.27
PVT1-219ENST00000523427 NPIPA5A0A0B4J1W7 369 aa23■■□□□ 1.27
PVT1-219ENST00000523427 NPIPA7E9PJI5 369 aa23■■□□□ 1.27
PVT1-219ENST00000523427 OIP5O43482 229 aa23■■□□□ 1.27
PVT1-219ENST00000523427 CD8AP01732 235 aa23■■□□□ 1.27
PVT1-219ENST00000523427 NPIPA8P0DM63 369 aa23■■□□□ 1.27
PVT1-219ENST00000523427 GCAP28676 217 aa23■■□□□ 1.27
PVT1-219ENST00000523427 ITGADQ13349 1161 aa23■■□□□ 1.27
PVT1-219ENST00000523427 TRIM46Q7Z4K8 759 aa23■■□□□ 1.27
PVT1-219ENST00000523427 MISPQ8IVT2 679 aa23■■□□□ 1.27
PVT1-219ENST00000523427 CLHC1Q8NHS4 586 aa23■■□□□ 1.27
PVT1-219ENST00000523427 ZFP28Q8NHY6 868 aa23■■□□□ 1.27
PVT1-219ENST00000523427 FAM110BQ8TC76 370 aa23■■□□□ 1.27
PVT1-219ENST00000523427 ANP32BQ92688 251 aaKnown RBP23■■□□□ 1.27
PVT1-219ENST00000523427 HOXB13Q92826 284 aaPredicted RBP23■■□□□ 1.27
PVT1-219ENST00000523427 PPCDCQ96CD2 204 aa23■■□□□ 1.27
PVT1-219ENST00000523427 GIMAP5Q96F15 307 aa23■■□□□ 1.27
PVT1-219ENST00000523427 RHNO1Q9BSD3 238 aa23■■□□□ 1.27
PVT1-219ENST00000523427 POTEKPQ9BYX7 375 aa23■■□□□ 1.27
PVT1-219ENST00000523427 TRIM2Q9C040 744 aa23■■□□□ 1.27
PVT1-219ENST00000523427 TNFRSF12AQ9NP84 129 aa23■■□□□ 1.27
PVT1-219ENST00000523427 PRSS50Q9UI38 385 aa23■■□□□ 1.27
PVT1-219ENST00000523427 PTGDR2Q9Y5Y4 395 aa23■■□□□ 1.27
PVT1-219ENST00000523427 IGHV4-30-2A0A087WSY4 118 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 ZNF814B7Z6K7 855 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 ZNF195O14628 629 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 PHF1O43189 567 aaPredicted RBP22.99■■□□□ 1.27
PVT1-219ENST00000523427 YES1P07947 543 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 PYGBP11216 843 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 ENPP1P22413 925 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 EIF1P41567 113 aaKnown RBP22.99■■□□□ 1.27
PVT1-219ENST00000523427 ZNF117Q03924 483 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 P2RY6Q15077 328 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 LRIG3Q6UXM1 1119 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 MS4A4EQ96PG1 132 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 TSSK3Q96PN8 268 aa22.99■■□□□ 1.27
PVT1-219ENST00000523427 IQCGQ9H095 443 aaKnown RBP22.99■■□□□ 1.27
PVT1-219ENST00000523427 BARX1Q9HBU1 254 aaPredicted RBP22.99■■□□□ 1.27
PVT1-219ENST00000523427 CDH11P55287 796 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 NDUFAF6Q330K2 333 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 CFAP157Q5JU67 520 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 CBLN3Q6UW01 205 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 DNM1P46Q6ZS02 220 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 HTRA1Q92743 480 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 LRTM1Q9HBL6 345 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 BAIAP2L1Q9UHR4 511 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 B3GALT5Q9Y2C3 310 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 CARD8Q9Y2G2 431 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 FIS1Q9Y3D6 152 aa22.98■■□□□ 1.27
PVT1-219ENST00000523427 CUBNO60494 3623 aa22.97■■□□□ 1.27
PVT1-219ENST00000523427 A0A1W2PNR3 127 aa22.97■■□□□ 1.27
PVT1-219ENST00000523427 FAM234BA2RU67 622 aa22.97■■□□□ 1.27
PVT1-219ENST00000523427 IFI6P09912 130 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms