RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 GABRG2P18507 467 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 TGFBR2P37173 567 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 KCNJ5P48544 419 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 PDX1P52945 283 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 WASH2PQ6VEQ5 465 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 GINS4Q9BRT9 223 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 DDX31Q9H8H2 851 aaKnown RBP12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 PISDQ9UG56 409 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC35A3Q9Y2D2 325 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 BRINP1O60477 761 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 MAOAP21397 527 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR3A3P47888 321 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR3A2P47893 321 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 GDI2P50395 445 aaKnown RBP12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 WNT4P56705 351 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 TLE3Q04726 772 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 NHSL2Q5HYW2 709 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 QSOX2Q6ZRP7 698 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF227Q86WZ6 799 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 PIGUQ9H490 435 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 NT5DC2Q9H857 520 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 DAPP1Q9UN19 280 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 MED16Q9Y2X0 877 aa12.21□□□□□ -0.45
PCDHGB1-201ENST00000523390 LOC105369274A0A096LPK9 316 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 LOC102723532A0A0G2JNH3 316 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 GSTT2BP0CG30 244 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 FNTBP49356 437 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 LIM2P55344 173 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 PER3P56645 1201 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 GMFBP60983 142 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 TP53I3Q53FA7 332 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 TRMT12Q53H54 448 aaKnown RBP12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 RBM45Q8IUH3 476 aaKnown RBP12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 ABHD11Q8NFV4 315 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 LINC00615Q96LM1 132 aaPredicted RBP12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 BEX2Q9BXY8 128 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 CHIAQ9BZP6 476 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMEM38AQ9H6F2 299 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 BEX1Q9HBH7 125 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 NFKBIL1Q9UBC1 381 aaPredicted RBP12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 PARP14Q460N5 1801 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 SCN10AQ9Y5Y9 1956 aa12.21□□□□□ -0.46
PCDHGB1-201ENST00000523390 PNMTP11086 282 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 BCAP31P51572 246 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF91Q05481 1191 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 POU4F2Q12837 409 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 KCNAB1Q14722 419 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 C6orf183Q5T699 404 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 EEF1A1P5Q5VTE0 462 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NCCRP1Q6ZVX7 275 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NLRP8Q86W28 1048 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SYT14Q8NB59 555 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR6C1Q96RD1 312 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ALG8Q9BVK2 526 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 FAIMQ9NVQ4 179 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 TAS2R10Q9NYW0 307 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SNX11Q9Y5W9 270 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NINQ8N4C6 2090 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 TRBV11-1A0A0K0K1C0 115 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NARSO43776 548 aaKnown RBP12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 CER1O95813 267 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 PIGAP37287 484 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 FOLR3P41439 243 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 B3GLCTQ6Y288 498 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ETFBKMTQ8IXQ9 262 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR13C2Q8NGS9 318 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SETD6Q8TBK2 473 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NIPSNAP1Q9BPW8 284 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR10A5Q9H207 317 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 OLAHQ9NV23 265 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SPAG17Q6Q759 2223 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 A0A1W2PPC4 97 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ADH7P40394 386 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRKXP51817 358 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 PGGHGQ32M88 737 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 AMBRA1Q9C0C7 1298 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 CXorf51AA0A1B0GTR3 108 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 TVP23AA6NH52 213 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 YY2O15391 372 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 CDK1P06493 297 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC6A8P48029 635 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ACTA2P62736 377 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 ACTG2P63267 376 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 HSF2Q03933 536 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 KLHL26Q53HC5 615 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 NDNFQ8TB73 568 aa12.2□□□□□ -0.46
PCDHGB1-201ENST00000523390 S100A16Q96FQ6 103 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms