RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 RNF122Q9H9V4 155 aa9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 UBTD1Q9HAC8 227 aa9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 MED17Q9NVC6 651 aa9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 ZNF226Q9NYT6 803 aa9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 FAF1Q9UNN5 650 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
CTNNA1-235ENST00000522730 A0A087WZY1 265 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 IGLV3-32A0A0A0MS00 114 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 A0A1W2PPR1 153 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 NPIPB8E9PQR5 432 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 SCAMP2O15127 329 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 TBX19O60806 448 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 LYPLA1O75608 230 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 C6orf47O95873 294 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 BPGMP07738 259 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ME2P23368 584 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 SFTPDP35247 375 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 SOAT1P35610 550 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 MAP3K8P41279 467 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 CARD18P57730 90 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 PDE7AQ13946 482 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 LSM12Q3MHD2 195 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 C6orf136Q5SQH8 315 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 HBMQ6B0K9 141 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 GGNQ86UU5 652 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 LILRA2Q8N149 483 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ZNF614Q8N883 585 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 OR10D3Q8NH80 312 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 OR5AK3PQ8NH89 298 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 FAM110BQ8TC76 370 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ADAMTS15Q8TE58 950 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ROBO4Q8WZ75 1007 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 OR5P2Q8WZ92 322 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 OSTF1Q92882 214 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 MBD6Q96DN6 1003 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 PRPF18Q99633 342 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 KLHDC3Q9BQ90 382 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 CXorf36Q9H7Y0 433 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ELOVL5Q9NYP7 299 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 ATP6V1HQ9UI12 483 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 MCTS1Q9ULC4 181 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 CARD8Q9Y2G2 431 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 EMC9Q9Y3B6 208 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 TESMINQ9Y4I5 508 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 KCNE3Q9Y6H6 103 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 NAV3Q8IVL0 2385 aa9.19□□□□□ -0.94
CTNNA1-235ENST00000522730 A0A0J9YW62 118 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 POLR3GO15318 223 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 BIRC5O15392 142 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 OIP5O43482 229 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CYP7B1O75881 506 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 NTN1O95631 604 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 HSPA4LO95757 839 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CGAP01215 116 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 IFI6P09912 130 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 FCGR2AP12318 317 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CD53P19397 219 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 IL11P20809 199 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ARRB2P32121 409 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 RPL3P39023 403 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 FRKP42685 505 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 GYS2P54840 703 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CASP9P55211 416 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 FGFBP1Q14512 234 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CD226Q15762 336 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 PDCD2Q16342 344 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 TMEM44Q2T9K0 475 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 PLPPR5Q32ZL2 321 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 NDUFAF6Q330K2 333 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 PDSS1Q5T2R2 415 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ZCCHC12Q6PEW1 402 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 P3H2Q8IVL5 708 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 CLEC4FQ8N1N0 589 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 METTL25Q8N6Q8 603 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 HOXB13Q92826 284 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ZBTB8AQ96BR9 441 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ZNF764Q96H86 408 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 REXO5Q96IC2 774 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 SMR3AQ99954 134 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ACTRT3Q9BYD9 372 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 PIGUQ9H490 435 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 SIRT3Q9NTG7 399 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 ATAD3AQ9NVI7 634 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 NTMQ9P121 344 aa9.18□□□□□ -0.94
CTNNA1-235ENST00000522730 H3BNH8 94 aa9.17□□□□□ -0.94
CTNNA1-235ENST00000522730 SIAH2O43255 324 aa9.17□□□□□ -0.94
CTNNA1-235ENST00000522730 ITM2AO43736 263 aa9.17□□□□□ -0.94
CTNNA1-235ENST00000522730 SMPD2O60906 423 aa9.17□□□□□ -0.94
CTNNA1-235ENST00000522730 CPSF4O95639 269 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms