RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GAREM1Q9H706 876 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 TAS2R16Q9NYV7 291 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CLCA3PQ9Y6N3 262 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 CDH10Q9Y6N8 788 aa17.05■□□□□ 0.32
TRAPPC9-210ENST00000521667 A0A0B4J2E0 115 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 A0A1B0GX12 115 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 TCRBV16S1A1N1A0A5B0 115 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC22A1O15245 554 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ANKRD34CP0C6C1 535 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 CDK4P11802 303 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 LIPAP38571 399 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ACAA2P42765 397 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ELAVL1Q15717 326 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF367Q7RTV3 350 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF550Q7Z398 422 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZSCAN1Q8NBB4 408 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ARSGQ96EG1 525 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF582Q96NG8 517 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 TEX12Q9BXU0 123 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 TRIM2Q9C040 744 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 OR8D2Q9GZM6 311 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 FLRT3Q9NZU0 649 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 SRPK3Q9UPE1 567 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 A0A1W2PQM1 296 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 POLR1CO15160 346 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 CHP2O43745 196 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 RPLP0P05388 317 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 RORAP35398 523 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 PPICP45877 212 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 EFNA3P52797 238 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 CCL7P80098 99 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 PRKCDQ05655 676 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 NCF4Q15080 339 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 DTWD2Q8NBA8 298 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 OR4Q3Q8NH05 313 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 OR4C3Q8NH37 302 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 WDR36Q8NI36 951 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 GRHL3Q8TE85 626 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM80Q96HE8 168 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 MKKSQ9NPJ1 570 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 CFL2Q9Y281 166 aa17.04■□□□□ 0.32
TRAPPC9-210ENST00000521667 A0A1B0GWA3 101 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 SERINC4A6NH21 518 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 UNC119BA6NIH7 251 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 ADAM11O75078 769 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 DDAH2O95865 285 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 IGKV3-11P04433 115 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 IFI30P13284 250 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 ACY1Q03154 408 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC30A6Q6NXT4 461 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 LSMEM1Q8N8F7 131 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC2A12Q8TD20 617 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 HS6ST2Q96MM7 605 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 DPH1Q9BZG8 443 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 C20orf141Q9NUB4 165 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMEM5Q9Y2B1 443 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 MED31Q9Y3C7 131 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 MAKP20794 623 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 CSTF2P33240 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 NSDHLQ15738 373 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 PGGHGQ32M88 737 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 CDK20Q8IZL9 346 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 CYP4Z2PQ8N1L4 340 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 EID2Q8N6I1 236 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 OR4D9Q8NGE8 314 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZNF721Q8TF20 911 aa17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 SIDT1Q9NXL6 827 aaKnown RBP17.03■□□□□ 0.32
TRAPPC9-210ENST00000521667 SPEGQ15772 3267 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 SNTNA6NMZ2 147 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 KPNA4O00629 521 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 PRKNO60260 465 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 CSTAP01040 98 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 LSM3P62310 102 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 ARMCX4Q5H9R4 360 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 TMPRSS11FQ6ZWK6 438 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC46A3Q7Z3Q1 461 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 PRSS58Q8IYP2 241 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 OR2T33Q8NG76 320 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 TBC1D15Q8TC07 691 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 BRIX1Q8TDN6 353 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 NAT6Q93015 286 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 EFHD2Q96C19 240 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 BPIFA2Q96DR5 249 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 ZC3H10Q96K80 434 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 SAMD8Q96LT4 415 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 LMF1Q96S06 567 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 SLC7A5P2Q9GIP4 190 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 NXF5Q9H1B4 397 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 LRRN3Q9H3W5 708 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 ATP13A2Q9NQ11 1180 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 GPR52Q9Y2T5 361 aa17.02■□□□□ 0.32
TRAPPC9-210ENST00000521667 SURF4O15260 269 aa17.01■□□□□ 0.31
TRAPPC9-210ENST00000521667 PRODHO43272 600 aa17.01■□□□□ 0.31
TRAPPC9-210ENST00000521667 IL33O95760 270 aa17.01■□□□□ 0.31
TRAPPC9-210ENST00000521667 CTBP2P56545 445 aa17.01■□□□□ 0.31
TRAPPC9-210ENST00000521667 VBP1P61758 197 aa17.01■□□□□ 0.31
TRAPPC9-210ENST00000521667 ALG10BQ5I7T1 473 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms