RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SH2D2AQ9NP31 389 aa2.4□□□□□ -2.03
SKP1-207ENST00000520417 IL19Q9UHD0 177 aa2.4□□□□□ -2.03
SKP1-207ENST00000520417 SAMD4AQ9UPU9 718 aaKnown RBP2.4□□□□□ -2.03
SKP1-207ENST00000520417 ZMYM6O95789 1325 aa2.4□□□□□ -2.03
SKP1-207ENST00000520417 DHX29Q7Z478 1369 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 IGKV1D-17A0A075B6S4 117 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 GJE1A6NN92 205 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 K7N7A8 449 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 DLGAP1O14490 977 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 UFL1O94874 794 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 AKR7A3O95154 331 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 MT-ND3P03897 115 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 PCCAP05165 728 aaPredicted RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 STMN1P16949 149 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 AHCYP23526 432 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 AQP1P29972 269 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 SFNP31947 248 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 EPHX2P34913 555 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 LONP1P36776 959 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 DLSTP36957 453 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 HTR5AP47898 357 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 NUMBP49757 651 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 MTTPP55157 894 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 WASHC5Q12768 1159 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 ARFRP1Q13795 201 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 LEG1Q6P5S2 330 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 SERPINA9Q86WD7 417 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 PIGCQ92535 297 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 CCDC47Q96A33 483 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 NSMCE2Q96MF7 247 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 NFKBIZQ9BYH8 718 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 XPO4Q9C0E2 1151 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 POLR2J2Q9GZM3 115 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 ZDHHC11Q9H8X9 412 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 ANO10Q9NW15 660 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 PAK1IP1Q9NWT1 392 aaPredicted RBP2.39□□□□□ -2.03
SKP1-207ENST00000520417 ANKMY1Q9P2S6 941 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 TRIM10Q9UDY6 481 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 KCNN3Q9UGI6 736 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 PHF11Q9UIL8 331 aa2.39□□□□□ -2.03
SKP1-207ENST00000520417 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 A0A0U1RRA0 63 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 PSMB11A5LHX3 300 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 SLC9B1P1A6NJY1 282 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 H0YL77 283 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 EFNA2O43921 213 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 TRIM3O75382 744 aaPredicted RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 SLC25A27O95847 323 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 CHRNA1P02708 482 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 THRBP10828 461 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 HSPA1LP34931 641 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 KIR2DS2P43631 304 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 LHX2P50458 406 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 NOVA1P51513 510 aaKnown RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 RPL8P62917 257 aaKnown RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 MYBPC1Q00872 1141 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 IL23RQ5VWK5 629 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 SCYL2Q6P3W7 929 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 WDR88Q6ZMY6 472 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 HSD11B1LQ7Z5J1 315 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 ARL10Q8N8L6 244 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 OR52E1Q8NGJ3 308 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 SLC13A3Q8WWT9 602 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 FOPNLQ96NB1 174 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 FTHL17Q9BXU8 183 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 SIRPDQ9H106 197 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 BCAP29Q9UHQ4 241 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 DNPEPQ9ULA0 475 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 PLA2G4CQ9UP65 541 aa2.38□□□□□ -2.03
SKP1-207ENST00000520417 SPAG9O60271 1321 aaKnown RBP2.38□□□□□ -2.03
SKP1-207ENST00000520417 MTCL1Q9Y4B5 1905 aaKnown RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 CFAP73A6NFT4 308 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 NBR2O15453 112 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 MT-ATP6P00846 226 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 IGKV1-17P01599 117 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 ALPPP05187 535 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 GSTT2P0CG29 244 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 GSTT2BP0CG30 244 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 ALPPL2P10696 532 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 YBEYP58557 167 aaPredicted RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 PRPS1P60891 318 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 LRIT3Q3SXY7 679 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 OR52W1Q6IF63 320 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 OR6B2Q6IFH4 312 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 RAB12Q6IQ22 244 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 STAC2Q6ZMT1 411 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 ABHD12BQ7Z5M8 362 aaPredicted RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 C17orf82Q86X59 251 aaPredicted RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 TMEM61Q8N0U2 210 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 DNAJA4Q8WW22 397 aaPredicted RBP2.37□□□□□ -2.03
SKP1-207ENST00000520417 OR1E3Q8WZA6 343 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 CHIAQ9BZP6 476 aa2.37□□□□□ -2.03
SKP1-207ENST00000520417 COG4Q9H9E3 785 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms