RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 OR52N1Q8NH53 320 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 PIGXQ8TBF5 258 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 BRIX1Q8TDN6 353 aaKnown RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 XAGE5Q8WWM1 108 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 ACOT11Q8WXI4 607 aaPredicted RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 OSTF1Q92882 214 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 UCN3Q969E3 161 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 DACT3Q96B18 629 aaPredicted RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 SLC22A18Q96BI1 424 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 TRMT61AQ96FX7 289 aaKnown RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 MS4A4EQ96PG1 132 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 OR2M4Q96R27 311 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 OR2A14Q96R47 310 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 BBS4Q96RK4 519 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 IL4I1Q96RQ9 567 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SERINC2Q96SA4 455 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 NRTNQ99748 197 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 C17orf62Q9BQA9 187 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SLC17A9Q9BYT1 436 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 BARHL1Q9BZE3 327 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SRRQ9GZT4 340 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 C6orf62Q9GZU0 229 aaPredicted RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 NUAK2Q9H093 628 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 FN3KQ9H479 309 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 RNF167Q9H6Y7 350 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 TRIM45Q9H8W5 580 aaPredicted RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 LYRM4Q9HD34 91 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 C12orf4Q9NQ89 552 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 POLE3Q9NRF9 147 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 ASB6Q9NWX5 421 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 FBXL12Q9NXK8 326 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 DNAJC27Q9NZQ0 273 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 KCMF1Q9P0J7 381 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 C5AR2Q9P296 337 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 PTGFRNQ9P2B2 879 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SERGEFQ9UGK8 458 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 APOBEC3BQ9UH17 382 aaKnown RBP4.7□□□□□ -1.66
SDC2-204ENST00000519914 CLEC2DQ9UHP7 191 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 PHF11Q9UIL8 331 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 NUP50Q9UKX7 468 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 TBC1D24Q9ULP9 559 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SSR3Q9UNL2 185 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 KLHL20Q9Y2M5 609 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 SPEF1Q9Y4P9 236 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 COLEC10Q9Y6Z7 277 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 FANCMQ8IYD8 2048 aa4.7□□□□□ -1.66
SDC2-204ENST00000519914 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 A0A1W2PQU0 124 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PRSS38A1L453 326 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 H3BN98 237 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 K7EQS6 105 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CTDSP2O14595 271 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 MYL12BO14950 172 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SURF4O15260 269 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ERI3O43414 337 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 TLX2O43763 284 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF254O75437 659 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PCDH8O95206 1070 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LYPD3O95274 346 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 APBB3O95704 486 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 AK1P00568 194 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 APOA1P02647 267 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 THY1P04216 161 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 HMGN1P05114 100 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CHRM5P08912 532 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 LIMS3P0CW19 117 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LIMS4P0CW20 117 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 NR2F6P10588 404 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CKMT1AP12532 417 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PNLIPP16233 465 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 NAGAP17050 411 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TNNI3P19429 210 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CERS1P27544 350 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 POU1F1P28069 291 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 HTR1FP30939 366 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 TNFSF8P32971 234 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 PTGS2P35354 604 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 FEN1P39748 380 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 ETV5P41161 510 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CASP3P42574 277 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CBX5P45973 191 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 CAPZA2P47755 286 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SLC9A3P48764 834 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ETV1P50549 477 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF136P52737 540 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ADPRHP54922 357 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 EEF1A1P68104 462 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 RNF4P78317 190 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 RGS1Q08116 209 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF155Q12901 538 aaPredicted RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 SLC13A2Q13183 592 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 DUSP8Q13202 625 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 SGCGQ13326 291 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ASAH1Q13510 395 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LRRC32Q14392 662 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 NFATC4Q14934 902 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 LARS2Q15031 903 aaKnown RBP4.69□□□□□ -1.66
SDC2-204ENST00000519914 KCNJ8Q15842 424 aa4.69□□□□□ -1.66
SDC2-204ENST00000519914 ZNF79Q15937 498 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms