RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 UGT2B7P16662 529 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 GAS6Q14393 721 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 YIF1BQ5BJH7 314 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 CTSL3PQ5NE16 218 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 MLIPQ5VWP3 458 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PODNL1Q6PEZ8 512 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 NRMQ8IXM6 262 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 OR4F15Q8NGB8 312 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 CREB3L4Q8TEY5 395 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 CSNK1G1Q9HCP0 422 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 A0A0D9SG52 128 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TRBV4-1A0A0J9YWV2 114 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 H3BSH0 61 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 H7BY64 318 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM189-UBE2V1I3L0A0 370 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PSMD9O00233 223 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TPOP07202 933 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF823P16415 610 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 FRKP42685 505 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SLC1A3P43003 542 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 MTNR1BP49286 362 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 C19orf57Q0VDD7 668 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SLC22A8Q8TCC7 542 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SAMD8Q96LT4 415 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PRAP1Q96NZ9 151 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 DGAT2Q96PD7 388 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 QRSL1Q9H0R6 528 aaKnown RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 RPS10P5Q9NQ39 176 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 IL20RAQ9UHF4 553 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 LAMB1P07942 1786 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 BORCS7-ASMTA0A0B4J1R7 106 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TUBAL3A6NHL2 446 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 AMY2AP04746 511 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PRSS3P35030 304 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 RGS19P49795 217 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PLEKHN1Q494U1 663 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 PRRT3Q5FWE3 981 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 RASGRP3Q8IV61 690 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 RDH10Q8IZV5 341 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 OR52I1Q8NGK6 324 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 WDR92Q96MX6 357 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 C12orf57Q99622 126 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TBL1XR1Q9BZK7 514 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SLC38A1Q9H2H9 487 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 MYNNQ9NPC7 610 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 HRASLS2Q9NWW9 162 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 ALKBH4Q9NXW9 302 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 SLC23A1Q9UHI7 598 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TMEFF2Q9UIK5 374 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 M0R082 166 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CSF1P09603 554 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ARAFP10398 606 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ATP5A1P25705 553 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 S100GP29377 79 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 GDNFP39905 211 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 AQP2P41181 271 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CCDC116Q8IYX3 515 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 NDUFB11Q9NX14 153 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SLC25A37Q9NYZ2 338 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 GLOD5A6NK44 160 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 B4GALT2O60909 372 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 VNN2O95498 520 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 BPIP17213 487 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 AHCYP23526 432 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 EPHA2P29317 976 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 NTSR1P30989 418 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 NRG3P56975 720 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 IFITM3Q01628 133 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 OC90Q02509 493 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 PRSS36Q5K4E3 855 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF362Q5T0B9 420 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 IER5LQ5T953 404 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF852Q6ZMS4 543 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF582Q96NG8 517 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CNN2Q99439 309 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 DDOQ99489 341 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ASIC5Q9NY37 505 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 LAMP5Q9UJQ1 280 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SRCAPQ6ZRS2 3230 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 TRAV18A0A075B6X5 111 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 A0A0A6YYJ9 748 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 RNGTTO60942 597 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ADRB1P08588 477 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 TPT1P13693 172 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CCR6P51684 374 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 HYAL2Q12891 473 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZC3H14Q6PJT7 736 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 B3GLCTQ6Y288 498 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 C17orf107Q6ZR85 190 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 NLRP8Q86W28 1048 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SERPINA12Q8IW75 414 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 OR5M3Q8NGP4 307 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms