RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 FPR1P21462 350 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 RPS4Y1P22090 263 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 LCN1P31025 176 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 PRKAR1BP31321 381 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 SOX11P35716 441 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ST13P50502 369 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ALDH3A2P51648 485 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 AQP4P55087 323 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 VLDLRP98155 873 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 TAF11Q15544 211 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 LTB4RQ15722 352 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF750Q32MQ0 723 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 NHSL2Q5HYW2 709 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 FAM180BQ6P0A1 224 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 FAM111BQ6SJ93 734 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 TTLL10Q6ZVT0 673 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 OVCH1Q7RTY7 1134 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 AMIGO2Q86SJ2 522 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 DOLPP1Q86YN1 238 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 PRSS58Q8IYP2 241 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ADAMTS15Q8TE58 950 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 NACC2Q96BF6 587 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 RBM18Q96H35 190 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF354BQ96LW1 612 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 VSTM2LQ96N03 204 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 GPR137Q96N19 417 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF300Q96RE9 604 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 DMRTA2Q96SC8 542 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 PINK1Q9BXM7 581 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ALOXE3Q9BYJ1 711 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 POLR2J2Q9GZM3 115 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF350Q9GZX5 532 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 POLR2J3Q9H1A7 115 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC38A1Q9H2H9 487 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 COQ10BQ9H8M1 238 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 NDUFAF4Q9P032 175 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 HCN3Q9P1Z3 774 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 LRFN1Q9P244 771 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 CTSFQ9UBX1 484 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 KCNN3Q9UGI6 736 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 OAZ3Q9UMX2 235 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 PPIEQ9UNP9 301 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 CFL2Q9Y281 166 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
PDLIM5-217ENST00000512274 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 E9PLN8 166 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 H0YAE9 185 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 DLGAP1O14490 977 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ADAM10O14672 748 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 OR10H2O60403 315 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF682O95780 498 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ALPLP05186 524 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 CHRM4P08173 479 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 NR2F1P10589 423 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RHCEP18577 417 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 FBLP22087 321 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 OR1D4P47884 311 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 LIMS1P48059 325 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RPS6KA3P51812 740 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RPS26P62854 115 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 MAT1AQ00266 395 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RHAGQ02094 409 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ALDH6A1Q02252 535 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 STX4Q12846 297 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC13A2Q13183 592 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 DUSP8Q13202 625 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ELAVL1Q15717 326 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SYPL1Q16563 259 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SYT16Q17RD7 645 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 COX15Q7KZN9 410 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 TSEN54Q7Z6J9 526 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 CBR4Q8N4T8 237 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC16A11Q8NCK7 471 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 C17orf47Q8NEP4 570 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 TOR1AIP2Q8NFQ8 470 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 FAM110BQ8TC76 370 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 PHF10Q8WUB8 498 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 XAGE5Q8WWM1 108 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 KAT2AQ92830 837 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RIT1Q92963 219 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 TMBIM1Q969X1 311 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC35A4Q96G79 324 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 PEX11GQ96HA9 241 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 FBXL20Q96IG2 436 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 VPS50Q96JG6 964 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ART5Q96L15 291 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF570Q96NI8 536 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 DGAT2Q96PD7 388 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ALPK1Q96QP1 1244 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC29A1Q99808 456 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 CIB1Q99828 191 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RBM4BQ9BQ04 359 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 RBM4Q9BWF3 364 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ANKRD60Q9BZ19 345 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 TRIM45Q9H8W5 580 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 MTHFD2LQ9H903 347 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 WDR54Q9H977 334 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ADAP2Q9NPF8 381 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms