RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SPATA9	Q9BWV2	254 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	TBL1XR1	Q9BZK7	514 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	HOXD1	Q9GZZ0	328 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ZFP64	Q9NPA5	681 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	DNAJB12	Q9NXW2	375 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ICAM5	Q9UMF0	924 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ANGPT4	Q9Y264	503 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	MED12	Q93074	2177 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	SHANK1	Q9Y566	2161 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ZIC3	O60481	467 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	RASAL1	O95294	804 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	DBI	P07108	87 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	UBTFL6	P0CB48	400 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	NID1	P14543	1247 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	ETS2	P15036	469 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	KDELR2	P33947	212 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	ADH7	P40394	386 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	ACAA2	P42765	397 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	MNAT1	P51948	309 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	HPCA	P84074	193 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	HSF1	Q00613	529 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	VEZF1	Q14119	521 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	NPTX1	Q15818	432 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	HYAL4	Q2M3T9	481 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	EIPR1	Q53HC9	387 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	CMPK2	Q5EBM0	449 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF311	Q5JNZ3	666 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	SAMD4B	Q5PRF9	694 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	FGD2	Q7Z6J4	655 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	TSEN54	Q7Z6J9	526 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	PLCZ1	Q86YW0	608 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	SPPL2C	Q8IUH8	684 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	CHERP	Q8IWX8	916 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	METTL25	Q8N6Q8	603 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	POC1B	Q8TC44	478 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	FIG4	Q92562	907 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	DEFB127	Q9H1M4	99 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	RYDEN	Q9NUL5	291 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	ASF1B	Q9NVP2	202 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	CALML5	Q9NZT1	146 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	PPP4R1L	Q9P1A2	415 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	C15orf41	Q9Y2V0	281 aa		13.23	□□□□□ -0.29
MATR3-238	ENST00000512107	CDHR4	A6H8M9	788 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	KLRC4-KLRK1	H3BQV0	150 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107		M0R3H8	397 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	EBAG9	O00559	213 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ARPC2	O15144	300 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	GYG2	O15488	501 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	CDC40	O60508	579 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	SNX4	O95219	450 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	IL11	P20809	199 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ENDOU	P21128	410 aa	Known RBP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	KCNJ5	P48544	419 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	TDGF1P3	P51864	188 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF136	P52737	540 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	B3GALT5-AS1	P59052	145 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	PPIA	P62937	165 aa	Known RBP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	LRRC23	Q53EV4	343 aa	Predicted RBP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	TBCEL	Q5QJ74	424 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	GLYAT	Q6IB77	296 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ERICH5	Q6P6B1	374 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	DHRS4L2	Q6PKH6	230 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	VTCN1	Q7Z7D3	282 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	PEX5L	Q8IYB4	626 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	OR1J4	Q8NGS1	313 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	GPR119	Q8TDV5	335 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF597	Q96LX8	424 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	BARD1	Q99728	777 aa	Known RBP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	LAT2	Q9GZY6	243 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	LRMDA	Q9H2I8	198 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	SLC6A15	Q9H2J7	730 aa		13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.22	□□□□□ -0.29
MATR3-238	ENST00000512107	ACOT8	O14734	319 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF264	O43296	627 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	HCRTR2	O43614	444 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	EFNA2	O43921	213 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	SEMA7A	O75326	666 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	CYP7B1	O75881	506 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	DNAJC8	O75937	253 aa	Predicted RBP	13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	PDE9A	O76083	593 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	NTN1	O95631	604 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	CSTA	P01040	98 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	THBS1	P07996	1170 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	UBL4A	P11441	157 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	SFTPC	P11686	197 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	IL7R	P16871	459 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	HTR2A	P28223	471 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	MASP1	P48740	699 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	RPP38	P78345	283 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	PLGLB1	Q02325	96 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	LIN52	Q52LA3	116 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	CYBRD1	Q53TN4	286 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ENPP6	Q6UWR7	440 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	CCDC121	Q6ZUS5	278 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	YRDC	Q86U90	279 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	PACS2	Q86VP3	889 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ARMC8	Q8IUR7	673 aa		13.21	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF843	Q8N446	348 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms