RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ACTRT2Q8TDY3 377 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 ZBTB8AQ96BR9 441 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
DDX41-210ENST00000509576 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
DDX41-210ENST00000509576 KLHL15Q96M94 604 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
DDX41-210ENST00000509576 TSSK3Q96PN8 268 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
DDX41-210ENST00000509576 REG4Q9BYZ8 158 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 TRIM2Q9C040 744 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 OR10A4Q9H209 315 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 ANKZF1Q9H8Y5 726 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 TBK1Q9UHD2 729 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 PRSS50Q9UI38 385 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 MCTS1Q9ULC4 181 aaKnown RBP11.87□□□□□ -0.51
DDX41-210ENST00000509576 ICAM5Q9UMF0 924 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
DDX41-210ENST00000509576 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■■ 29.5
DDX41-210ENST00000509576 A0A087WZY1 265 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 CENPVL1A0A0U1RR11 272 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 SHISA9B4DS77 424 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 CLOCKO15516 846 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 PLIN3O60664 434 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 ADAM11O75078 769 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 SHBGP04278 402 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 TUBBP07437 444 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 RPS4XP62701 263 aaKnown RBP11.86□□□□□ -0.51
DDX41-210ENST00000509576 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 ZNF672Q499Z4 452 aaPredicted RBP11.86□□□□□ -0.51
DDX41-210ENST00000509576 OLIG3Q7RTU3 272 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 LCA5Q86VQ0 697 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 GSPT2Q8IYD1 628 aaKnown RBP11.86□□□□□ -0.51
DDX41-210ENST00000509576 LILRA2Q8N149 483 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 CDRT4Q8N9R6 151 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 PIWIL2Q8TC59 973 aaKnown RBP11.86□□□□□ -0.51
DDX41-210ENST00000509576 ACMSDQ8TDX5 336 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
DDX41-210ENST00000509576 CDS1Q92903 461 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 MS4A4EQ96PG1 132 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 REEP4Q9H6H4 257 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 GIN1Q9NXP7 522 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 LIPT1Q9Y234 373 aa11.86□□□□□ -0.51
DDX41-210ENST00000509576 A0A1W2PNR3 127 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 A0A1W2PQD3 144 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 LSM1O15116 133 aaKnown RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 SEC22BO75396 215 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 SYNGR4O95473 234 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 H6PDO95479 791 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 ADAP00813 363 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 GSTA1P08263 222 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 ADH6P28332 368 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 ARRB2P32121 409 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 NTF4P34130 210 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 CLK3P49761 638 aaKnown RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 PSMD4P55036 377 aaKnown RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 DMTNQ08495 405 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 FAPQ12884 760 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 KLHL26Q53HC5 615 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 FBXO27Q8NI29 283 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 SMAP2Q8WU79 429 aaPredicted RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 ZNF300Q96RE9 604 aaPredicted RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 CCT7Q99832 543 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 TRAF4Q9BUZ4 470 aaPredicted RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 SERHL2Q9H4I8 314 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 LRTM1Q9HBL6 345 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 GLRX2Q9NS18 164 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 C1orf109Q9NX04 203 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 KCNE5Q9UJ90 142 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 STK38LQ9Y2H1 464 aa11.85□□□□□ -0.51
DDX41-210ENST00000509576 WBP11Q9Y2W2 641 aaKnown RBP11.85□□□□□ -0.51
DDX41-210ENST00000509576 IGHV4-30-2A0A087WSY4 118 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 TTC36A6NLP5 189 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 C9JVG2 144 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 SMAD9O15198 467 aaKnown RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 CD5LO43866 347 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 TMCC2O75069 709 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 BCAS1O75363 584 aaPredicted RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 HMGN2P05204 90 aaKnown RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 UROSP10746 265 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 MYL2P10916 166 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 PRKCAP17252 672 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 GPC1P35052 558 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 ZNF41P51814 821 aaPredicted RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 FOXG1P55316 489 aaPredicted RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 CARD18P57730 90 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 C21orf58P58505 322 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 DNAJB13P59910 316 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 RPL38P63173 70 aaKnown RBP11.84□□□□□ -0.51
DDX41-210ENST00000509576 PLAURQ03405 335 aa11.84□□□□□ -0.51
DDX41-210ENST00000509576 SPOCK1Q08629 439 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms