RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 OR4A15Q8NGL6 344 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 NEIL3Q8TAT5 605 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 FAM110BQ8TC76 370 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 JADE3Q92613 823 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 PERPQ96FX8 193 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 OR2B2Q9GZK3 357 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 SLC6A15Q9H2J7 730 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 RABEP2Q9H5N1 569 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 WDR55Q9H6Y2 383 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 POLE3Q9NRF9 147 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 EXD2Q9NVH0 621 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 GPATCH2Q9NW75 528 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 PPP4R1LQ9P1A2 415 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 ACAD8Q9UKU7 415 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 TRIM33Q9UPN9 1127 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 USF3Q68DE3 2245 aa8.33□□□□□ -1.08
UBE2D3-223ENST00000508249 IGLV3-32A0A0A0MS00 114 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 DEFB108AA8MXU0 73 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 H3BNH8 94 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 SCDO00767 359 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 GNB5O14775 395 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 FADS1O60427 444 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 SMPD2O60906 423 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 TRAPPC6AO75865 159 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 KCNK2O95069 426 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 UTS2O95399 124 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 KRT75O95678 551 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 ACP2P11117 423 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 TBXA2RP21731 343 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 LOXP28300 417 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 TIMP3P35625 211 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 KHKP50053 298 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 GAS1P54826 345 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 DSCR4P56555 118 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 UFM1P61960 85 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 DUSP5Q16690 384 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 KRTAP24-1Q3LI83 254 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 GLYR1Q49A26 553 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 ATAD3BQ5T9A4 648 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 FBXW10Q5XX13 1052 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 AAGABQ6PD74 315 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 MAVSQ7Z434 540 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 SLC16A11Q8NCK7 471 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 OR4N2Q8NGD1 307 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 PMM1Q92871 262 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 NEURL3Q96EH8 262 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 LRRC46Q96FV0 321 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 CHMP6Q96FZ7 201 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 MARK4Q96L34 752 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 PIGQQ9BRB3 760 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 SLCO1B3Q9NPD5 702 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 UBQLN4Q9NRR5 601 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 ROS1P08922 2347 aa8.32□□□□□ -1.08
UBE2D3-223ENST00000508249 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 A0A087WZY1 265 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 C15orf38-AP3S2A0A0A6YYH1 394 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 FAM234BA2RU67 622 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 AHRRA9YTQ3 701 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 RFXANKO14593 260 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PHF1O43189 567 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 EDF1O60869 148 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CPSF4O95639 269 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 EPPINO95925 133 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 ZCCHC18P0CG32 403 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 TROVE2P10155 538 aaKnown RBP eCLIP8.31□□□□□ -1.082e-9■□□□□ 10
UBE2D3-223ENST00000508249 MATN1P21941 496 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CHMP24386 653 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CHI3L1P36222 383 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 TRPC1P48995 793 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 AGFG1P52594 562 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 AQP5P55064 265 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 SUMO3P55854 103 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 HPCAP84074 193 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CRYZQ08257 329 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 SQLEQ14534 574 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 DCST2Q5T1A1 773 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 SAXO2Q658L1 398 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 BICRALQ6AI39 1079 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 C6orf120Q7Z4R8 191 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 IFNEQ86WN2 208 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CLECL1Q8IZS7 167 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 FADS6Q8N9I5 356 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 WDSUB1Q8N9V3 476 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PIK3R3Q92569 461 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 ITCHQ96J02 903 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 DACH2Q96NX9 599 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 GNRHR2Q96P88 292 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 OR7D2Q96RA2 312 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms