RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF264O43296 627 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 BCAS1O75363 584 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 MFN2O95140 757 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 CSTAP01040 98 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 IGHG3P01860 377 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 CELA3AP09093 270 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 UBL4AP11441 157 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 GDF1P27539 372 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 SRD5A2P31213 254 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 P2RX1P51575 399 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 CRYBA2P53672 197 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 EEF1A1P68104 462 aaKnown RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 SKP2Q13309 424 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 SLC10A1Q14973 349 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 FXNQ16595 210 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 SPATS1Q496A3 300 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 INTS11Q5TA45 600 aaKnown RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF836Q6ZNA1 936 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 IFNEQ86WN2 208 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 KRT73Q86Y46 540 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 GRAMD2AQ8IUY3 354 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 TOR1AIP2Q8NFQ8 470 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ARSGQ96EG1 525 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 GPR137Q96N19 417 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF607Q96SK3 696 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 SPATA5L1Q9BVQ7 753 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 OR2B2Q9GZK3 357 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 EXOSC3Q9NQT5 275 aaKnown RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ADA2Q9NZK5 511 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF443Q9Y2A4 671 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 CARD8Q9Y2G2 431 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 COL6A6A6NMZ7 2263 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 A0A1B0GVC2 190 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 ANKUB1A6NFN9 424 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 M0QX08 132 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 GTPBP1O00178 669 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 HCRTR2O43614 444 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 ZIC3O60481 467 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 SERPINB7O75635 380 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 PDE9AO76083 593 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 EPPINO95925 133 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 HSD17B1P14061 328 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 HTR1EP28566 365 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 AQP1P29972 269 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 PRKAR1BP31321 381 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 SUMO3P55854 103 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 DSCR4P56555 118 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 DMTNQ08495 405 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 GANABQ14697 944 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 LARS2Q15031 903 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 ZSWIM7Q19AV6 140 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 NDUFAF6Q330K2 333 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF311Q5JNZ3 666 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 SAMD4BQ5PRF9 694 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 MRPL2Q5T653 305 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 DHRS4L2Q6PKH6 230 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 CLIP4Q8N3C7 705 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 FAM83FQ8NEG4 500 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 OR4K17Q8NGC6 315 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 GPR119Q8TDV5 335 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 SH3YL1Q96HL8 342 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 PTGES2Q9H7Z7 377 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 RLIMQ9NVW2 624 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 DNAJB12Q9NXW2 375 aaKnown RBP11.67□□□□□ -0.54
TCOF1-210ENST00000506767 PACSIN3Q9UKS6 424 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
TCOF1-210ENST00000506767 TMEM229AB2RXF0 380 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 J3QKU1 62 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 SUSD5O60279 629 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 TPST1O60507 370 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 HCN1O60741 890 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 ADAM11O75078 769 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-210ENST00000506767 EDN3P14138 238 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 DPP4P27487 766 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 KDELR2P33947 212 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 KCNJ5P48544 419 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 TLE1Q04724 770 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 CEACAM7Q14002 265 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 TMEM44Q2T9K0 475 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 GLYR1Q49A26 553 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-210ENST00000506767 EIPR1Q53HC9 387 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 ARSKQ6UWY0 536 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 CHERPQ8IWX8 916 aaKnown RBP11.66□□□□□ -0.54
TCOF1-210ENST00000506767 ARHGAP24Q8N264 748 aa11.66□□□□□ -0.54
TCOF1-210ENST00000506767 RNF148Q8N7C7 305 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms