RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	C2orf54	Q08AI8	447 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF763	Q0D2J5	394 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	C2orf80	Q0P641	193 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	FOXF1	Q12946	379 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	RASA2	Q15283	850 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	TSNAXIP1	Q2TAA8	658 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	TMEM201	Q5SNT2	666 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	ACSM2B	Q68CK6	577 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	CYB5R2	Q6BCY4	276 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	GTF2IRD2B	Q6EKJ0	949 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	IL17REL	Q6ZVW7	336 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	FCRLA	Q7L513	359 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF551	Q7Z340	670 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	GTF2IRD2	Q86UP8	949 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	CPNE4	Q96A23	557 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	EGLN2	Q96KS0	407 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	KCNA7	Q96RP8	456 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	USB1	Q9BQ65	265 aa	Known RBP	11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	MANSC1	Q9H8J5	431 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	L2HGDH	Q9H9P8	463 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	MYNN	Q9NPC7	610 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	NGB	Q9NPG2	151 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	CBLN4	Q9NTU7	201 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	GIMAP4	Q9NUV9	329 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	DDX18	Q9NVP1	670 aa	Known RBP	11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	NINJ2	Q9NZG7	142 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	SENP1	Q9P0U3	644 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	STOML1	Q9UBI4	398 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	LPAR3	Q9UBY5	353 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	MRTO4	Q9UKD2	239 aa	Known RBP	11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	CCL27	Q9Y4X3	112 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	TIMM22	Q9Y584	194 aa		11.17	□□□□□ -0.62
LMNA-218	ENST00000502357	ETV2	O00321	342 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	UBFD1	O14562	309 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	LMX1B	O60663	402 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	PRKD3	O94806	890 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	KCNK2	O95069	426 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ELK4	P28324	431 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	NTF4	P34130	210 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	FRK	P42685	505 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	GNG11	P61952	73 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	KIAA0040	Q15053	153 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	PPA1	Q15181	289 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	TOMM34	Q15785	309 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	UAP1	Q16222	522 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF385B	Q569K4	471 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	TIMM23B	Q5SRD1	257 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	AGAP6	Q5VW22	663 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	CBLN3	Q6UW01	205 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	RELL1	Q8IUW5	271 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	SLC16A11	Q8NCK7	471 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	METTL6	Q8TCB7	284 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	PROX1	Q92786	737 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	PRR14	Q9BWN1	585 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	SHARPIN	Q9H0F6	387 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ALG2	Q9H553	416 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	TMEM216	Q9P0N5	145 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ICAM5	Q9UMF0	924 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	TENM1	Q9UKZ4	2725 aa		11.16	□□□□□ -0.62
LMNA-218	ENST00000502357	ESPN	B1AK53	854 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF195	O14628	629 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	SMAD9	O15198	467 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	RGS14	O43566	566 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	LY6H	O94772	140 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	SUPT7L	O94864	414 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	KCNH1	O95259	989 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	PABPC4L	P0CB38	370 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	PRPS2	P11908	318 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	IMPDH1	P20839	514 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	SFTPD	P35247	375 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF117	Q03924	483 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	BTK	Q06187	659 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	DUSP5	Q16690	384 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	MST1L	Q2TV78	715 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	PDSS1	Q5T2R2	415 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	CLEC2A	Q6UVW9	174 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	GPRIN3	Q6ZVF9	776 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	DCAKD	Q8WVC6	231 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	ADAD1	Q96M93	576 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	ZNF300	Q96RE9	604 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	DHRS9	Q9BPW9	319 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	AMBRA1	Q9C0C7	1298 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	GSTO2	Q9H4Y5	243 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	TNFRSF12A	Q9NP84	129 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	ACTL7B	Q9Y614	415 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	SLC25A15	Q9Y619	301 aa		11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	HEATR1	Q9H583	2144 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-218	ENST00000502357	DYSF	O75923	2080 aa		11.15	□□□□□ -0.63
LMNA-218	ENST00000502357	UQCRHL	A0A096LP55	91 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	IGHV3-15	A0A0B4J1V0	119 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	ESYT3	A0FGR9	886 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	OR5H1	A6NKK0	313 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	CYTIP	O60759	359 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	FES	P07332	822 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	PRKCA	P17252	672 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	USF1	P22415	310 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	LCN1	P31025	176 aa		11.14	□□□□□ -0.63
LMNA-218	ENST00000502357	ZNF41	P51814	821 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms