RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 P2RY14Q15391 338 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ALG11Q2TAA5 492 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TMEM91Q6ZNR0 172 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ABI3BPQ7Z7G0 1075 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TMEM99Q8N816 258 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 COX18Q8N8Q8 333 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CAMKVQ8NCB2 501 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TMEM239Q8WW34 195 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 KISS1RQ969F8 398 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 RNF31Q96EP0 1072 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SENP5Q96HI0 755 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ART5Q96L15 291 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TBX5Q99593 518 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ZFYVE21Q9BQ24 234 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 RNF32Q9H0A6 362 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TP63Q9H3D4 680 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 IL21RQ9HBE5 538 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 MOV10Q9HCE1 1003 aaKnown RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CLDND1Q9NY35 253 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 H2AFY2Q9P0M6 372 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 N6AMT1Q9Y5N5 214 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SIRT4Q9Y6E7 314 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 GXYLT2A0PJZ3 443 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 C12orf71A8MTZ7 269 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 CYR61O00622 381 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 APBB3O95704 486 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 CTHP32929 405 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 SRP54P61011 504 aaKnown RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 HYAL1Q12794 435 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 PRICKLE4Q2TBC4 344 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF362Q5T0B9 420 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 ZAR1Q86SH2 424 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 SLC7A5P1Q8MH63 180 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 CDRT4Q8N9R6 151 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 OR52L1Q8NGH7 329 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 OR13C2Q8NGS9 318 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 TP53INP1Q96A56 240 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 MRGPRX1Q96LB2 322 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 HS6ST2Q96MM7 605 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 CD180Q99467 661 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 COQ7Q99807 217 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 SOSTQ9BQB4 213 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 FBRSQ9HAH7 460 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 LYRM4Q9HD34 91 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 B3GAT2Q9NPZ5 323 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 DUSP22Q9NRW4 184 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 MAT2BQ9NZL9 334 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 SATB2Q9UPW6 733 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 NCKAP1Q9Y2A7 1128 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 A0A087WV62 115 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 B4DXG7 233 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 PLOD3O60568 738 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 GAAP10253 952 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF10P21506 573 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 HNRNPA2B1P22626 353 aaKnown RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 KIR2DL3P43628 341 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 RPS5P46782 204 aaKnown RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 PPP1CAP62136 330 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 MGAT2Q10469 447 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 KIAA1324Q6UXG2 1013 aaKnown RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 TMEM184AQ6ZMB5 413 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 TRIM48Q8IWZ4 208 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 RDH10Q8IZV5 341 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 VWA5B2Q8N398 1253 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 RERGQ96A58 199 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-204ENST00000501271 ALG8Q9BVK2 526 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 LMAN2LQ9H0V9 348 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 STARD5Q9NSY2 213 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 ASB6Q9NWX5 421 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 SCML1Q9UN30 329 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 POLHQ9Y253 713 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 COL4A2P08572 1712 aa9.14□□□□□ -0.95
CLIP1-204ENST00000501271 TDRD6O60522 2096 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 CCDC182A6NF36 153 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GTPBP1O00178 669 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 RNF13O43567 381 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 HRO43593 1189 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 HCRTR1O43613 425 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 RFPL3O75679 317 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 HLA-DQB1P01920 261 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 PAICSP22234 425 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 DDOSTP39656 456 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 MAP3K8P41279 467 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 SHHQ15465 462 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 TBRG1Q3YBR2 411 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 FCRLBQ6BAA4 426 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 DGAT2L6Q6ZPD8 337 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 MEPCEQ7L2J0 689 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 RNF113BQ8IZP6 322 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 Q8N402 240 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 LNX2Q8N448 690 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 ACBD7Q8N6N7 88 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms