RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 LCATP04180 440 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 AMY2AP04746 511 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 FUT1P19526 365 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 TP53I3Q53FA7 332 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 GPR148Q8TDV2 347 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 C22orf15Q8WYQ4 148 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF587Q96SQ5 575 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 OR2S2Q9NQN1 319 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ATXN7L1Q9ULK2 861 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 CACNG2Q9Y698 323 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 LOC102723532A0A0G2JNH3 316 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 RDH16O75452 317 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 PTH2RP49190 550 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 HSD17B7P56937 341 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 FAM198BQ6UWH4 519 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF761Q86XN6 746 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 TMEM102Q8N9M5 508 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 CLEC1AQ8NC01 280 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 GGHQ92820 318 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 SMIM14Q96QK8 99 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 C1QTNF2Q9BXJ5 285 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 TRAV18A0A075B6X5 111 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 GPR39O43194 453 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 EIF2B1Q14232 305 aaKnown RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 CYB561A3Q8NBI2 242 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 SLC7A13Q8TCU3 470 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ZMYND19Q96E35 227 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 TOE1Q96GM8 510 aaKnown RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 MYADMQ96S97 322 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 PBDC1Q9BVG4 233 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 FCRLBQ6BAA4 426 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 TMEM163Q8TC26 289 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 OR5B2Q96R09 309 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 UNKLQ9H9P5 680 aaKnown RBP17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF160Q9HCG1 818 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 ACAD8Q9UKU7 415 aa17.99■□□□□ 0.47
COL27A1-207ENST00000494090 LOC102725191A0A1B0GVB3 256 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 PRSS3P35030 304 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 METTL11BQ5VVY1 283 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 FAM83HQ6ZRV2 1179 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 NLGN4XQ8N0W4 816 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 OR51L1Q8NGJ5 315 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 FGF13Q92913 245 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 NT5C3BQ969T7 300 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF486Q96H40 463 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 CLSTN3Q9BQT9 956 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 FRS3O43559 492 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 DRD5P21918 477 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TM4SF4P48230 202 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 PODNL1Q6PEZ8 512 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TRAPPC6BQ86SZ2 158 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 KIF18BQ86Y91 864 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 MMP28Q9H239 520 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TRIM64BA6NI03 449 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 SULT2B1O00204 365 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 PAHP00439 452 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 CD6P30203 668 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 DEFB133Q30KQ1 61 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 UBTD2Q8WUN7 234 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 CNOT9Q92600 299 aaKnown RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 MUL1Q969V5 352 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 EMC3Q9P0I2 261 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 GHRLQ9UBU3 117 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 PTRH2Q9Y3E5 179 aaKnown RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 A0A0A6YYC8 382 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 OR52A4PA6NMU1 304 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 I3L1I5 382 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TFAP2AP05549 437 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 AKR1C4P17516 323 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TNFSF4P23510 183 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 MRPS10P82664 201 aaKnown RBP17.98■□□□□ 0.47
COL27A1-207ENST00000494090 TUBB3Q13509 450 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 SPCS2Q15005 226 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 IRF4Q15306 451 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 CMTM1Q8IZ96 169 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 CHRDQ9H2X0 955 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 RGCCQ9H4X1 137 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 IER3IP1Q9Y5U9 82 aa17.98■□□□□ 0.47
COL27A1-207ENST00000494090 PRAF2O60831 178 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 XCR1P46094 333 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 VASH1Q7L8A9 365 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 HCFC1R1Q9NWW0 138 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 TAS2R31P59538 309 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 ARG2P78540 354 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 MLLT11Q13015 90 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-207ENST00000494090 NFATC4Q14934 902 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 DCST2Q5T1A1 773 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 MAVSQ7Z434 540 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 PGBD5Q8N414 524 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 MAFIPQ8WZ33 124 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 ISL2Q96A47 359 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 SLC46A2Q9BY10 475 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 INPP5EQ9NRR6 644 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 POT1Q9NUX5 634 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 PRSS38A1L453 326 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 OR7A17O14581 309 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 HTR3BO95264 441 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 NPR2P20594 1047 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 AHRP35869 848 aa17.97■□□□□ 0.47
COL27A1-207ENST00000494090 LSSP48449 732 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms