RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FRG2CA6NGY1 282 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 UNC119BA6NIH7 251 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SURF4O15260 269 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 TOX3O15405 576 aaPredicted RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 YKT6O15498 198 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 PRODHO43272 600 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 LAMTOR5O43504 91 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SIGLEC6O43699 453 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CSO75390 466 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 IGKV3-11P04433 115 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 RPLP0P05388 317 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 INHBBP09529 407 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ZGLP1P0C6A0 271 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 IFI30P13284 250 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 GADD45AP24522 165 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 GRK5P34947 590 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ENTPD1P49961 510 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CTBP2P56545 445 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 PRKCDQ05655 676 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SIGLEC14Q08ET2 396 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 BIKQ13323 160 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SQSTM1Q13501 440 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 EBPQ15125 230 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ELAVL1Q15717 326 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ZSWIM7Q19AV6 140 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 MINDY4Q4G0A6 757 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CLEC12AQ5QGZ9 265 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 C1orf189Q5VU69 101 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SLC30A6Q6NXT4 461 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 TMEM71Q6P5X7 295 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 KIRREL2Q6UWL6 708 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CMIPQ8IY22 773 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OR52I1Q8NGK6 324 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OR13C2Q8NGS9 318 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SLC2A12Q8TD20 617 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF721Q8TF20 911 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OSTF1Q92882 214 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CRELD1Q96HD1 420 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 LRR1Q96L50 414 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OPALINQ96PE5 141 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SLC38A2Q96QD8 506 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OR5M11Q96RB7 305 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 G6PC3Q9BUM1 346 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 TAPBPLQ9BX59 468 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 NXF5Q9H1B4 397 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF304Q9HCX3 659 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 ATP13A2Q9NQ11 1180 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 PNO1Q9NRX1 252 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SIDT1Q9NXL6 827 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 IL20Q9NYY1 176 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CTSFQ9UBX1 484 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 SRPK3Q9UPE1 567 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 RPL36Q9Y3U8 105 aaKnown RBP9.82□□□□□ -0.84
CLCN6-208ENST00000494028 OR10H1Q9Y4A9 318 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 PCDHGA3Q9Y5H0 932 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 CABIN1Q9Y6J0 2220 aa9.82□□□□□ -0.84
CLCN6-208ENST00000494028 A0A0C4DFX4 3053 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SERINC4A6NH21 518 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 A8MUA0 341 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 KPNA4O00629 521 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TLX2O43763 284 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 CLPXO76031 633 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RAB36O95755 333 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 NGFRP08138 427 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 FUT1P19526 365 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TBXA2RP21731 343 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 CSTF2P33240 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TGFBR1P36897 503 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RBM34P42696 430 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 VBP1P61758 197 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 LSM3P62310 102 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 CSTF1Q05048 431 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 DCTN2Q13561 401 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SSX1Q16384 188 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SNAPC1Q16533 368 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 HLA-BQ31612 363 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 AADACL4Q5VUY2 407 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RNLSQ5VYX0 342 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 HSDL2Q6YN16 418 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF574Q6ZN55 896 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RRM2BQ7LG56 351 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF550Q7Z398 422 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TMEM151BQ8IW70 566 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RNF113BQ8IZP6 322 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 CYP4Z2PQ8N1L4 340 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 FAM181AQ8N9Y4 354 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 DYNC2LI1Q8TCX1 351 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 OIT3Q8WWZ8 545 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 PIGKQ92643 395 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 EFHD2Q96C19 240 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 LGALS12Q96DT0 336 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 RNF31Q96EP0 1072 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TMEM80Q96HE8 168 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SENP5Q96HI0 755 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SAMD8Q96LT4 415 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SLC46A1Q96NT5 459 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms