RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 MANFP55145 182 aaKnown RBP15.66■□□□□ 0.1
NUP50-218ENST00000493456 C21orf58P58505 322 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 BTKQ06187 659 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 UNC50Q53HI1 259 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 IKBIPQ70UQ0 350 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 FCRLAQ7L513 359 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 SLC43A2Q8N370 569 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 CDRT4Q8N9R6 151 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 GATSQ8NAP1 163 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 OR6Y1Q8NGX8 325 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 B4GALNT2Q8NHY0 566 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 MUCL1Q96DR8 90 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 TMEM237Q96Q45 408 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 PAFAH2Q99487 392 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 CACNG6Q9BXT2 260 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 FUT8Q9BYC5 575 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 SRXN1Q9BYN0 137 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 EQTNQ9NQ60 294 aa15.66■□□□□ 0.1
NUP50-218ENST00000493456 ZNF814B7Z6K7 855 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 ABCD4O14678 606 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 NTN1O95631 604 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 LINGO3P0C6S8 592 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 PKNOX1P55347 436 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 IRX1P78414 480 aaPredicted RBP15.65■□□□□ 0.1
NUP50-218ENST00000493456 LCP2Q13094 533 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 STK11Q15831 433 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 SPDYAQ5MJ70 313 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 TEX35Q5T0J7 233 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 CYB5R2Q6BCY4 276 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 CEP70Q8NHQ1 597 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 SH3YL1Q96HL8 342 aaPredicted RBP15.65■□□□□ 0.1
NUP50-218ENST00000493456 UBQLN4Q9NRR5 601 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 NINJ2Q9NZG7 142 aa15.65■□□□□ 0.1
NUP50-218ENST00000493456 CADP27708 2225 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 A0A1W2PQD3 144 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 KIF2AO00139 706 aaPredicted RBP15.64■□□□□ 0.09
NUP50-218ENST00000493456 SCDO00767 359 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 UBFD1O14562 309 aaKnown RBP15.64■□□□□ 0.09
NUP50-218ENST00000493456 SHC1P29353 583 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 FOXF1Q12946 379 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 TIMM23BQ5SRD1 257 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 C11orf71Q6IPW1 123 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 P2RY8Q86VZ1 359 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 FAM110BQ8TC76 370 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 IQCGQ9H095 443 aaKnown RBP15.64■□□□□ 0.09
NUP50-218ENST00000493456 BCO1Q9HAY6 547 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 CBLN4Q9NTU7 201 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 KLHL9Q9P2J3 617 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 ZNF180Q9UJW8 692 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 MGAT4BQ9UQ53 548 aa15.64■□□□□ 0.09
NUP50-218ENST00000493456 LYZL6O75951 148 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 KCNK2O95069 426 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 HSPA4LO95757 839 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 CSF3P09919 207 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 ZNF16P17020 682 aaPredicted RBP15.63■□□□□ 0.09
NUP50-218ENST00000493456 SRD5A1P18405 259 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 IMPDH1P20839 514 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 TTKP33981 857 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 GPC1P35052 558 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 OR3A2P47893 321 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 PRIM2P49643 509 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 HSPB3Q12988 150 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 RAB35Q15286 201 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 RELL1Q8IUW5 271 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 ZFP90Q8TF47 636 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 FAM168AQ92567 244 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 PROX1Q92786 737 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 KCNA7Q96RP8 456 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 DHRS9Q9BPW9 319 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 ZDHHC18Q9NUE0 388 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 TIMM22Q9Y584 194 aa15.63■□□□□ 0.09
NUP50-218ENST00000493456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.62■□□□□ 0.098e-12■■■■□ 24.5
NUP50-218ENST00000493456 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ESYT3A0FGR9 886 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 TRIM49D1C9J1S8 452 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 PDPK1O15530 556 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 RGS14O43566 566 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 LMX1BO60663 402 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 GGT1P19440 569 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 COX5AP20674 150 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ATP5F1P24539 256 aaPredicted RBP15.62■□□□□ 0.09
NUP50-218ENST00000493456 SERPINB4P48594 390 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 CD226Q15762 336 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 IMPG1Q17R60 797 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 UBAP2Q5T6F2 1119 aaKnown RBP15.62■□□□□ 0.09
NUP50-218ENST00000493456 TMEM108Q6UXF1 575 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 Q6ZSR9 355 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ZNF551Q7Z340 670 aaPredicted RBP15.62■□□□□ 0.09
NUP50-218ENST00000493456 MTERF4Q7Z6M4 381 aaKnown RBP15.62■□□□□ 0.09
NUP50-218ENST00000493456 ZAR1Q86SH2 424 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 SLC22A9Q8IVM8 553 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 FBXL14Q8N1E6 418 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 MUC15Q8N387 334 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ZNF525Q8N782 197 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ZFP28Q8NHY6 868 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 GIMAP5Q96F15 307 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 ZNF764Q96H86 408 aaPredicted RBP15.62■□□□□ 0.09
NUP50-218ENST00000493456 MS4A4EQ96PG1 132 aa15.62■□□□□ 0.09
NUP50-218ENST00000493456 KLHDC3Q9BQ90 382 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms