RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 OR1L3Q8NH93 324 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 EXD1Q8NHP7 514 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CFAP61Q8NHU2 1237 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TRPC4APQ8TEL6 797 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TFB1MQ8WVM0 346 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 STARD8Q92502 1023 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 HSD17B8Q92506 261 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SYN2Q92777 582 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NAT6Q93015 286 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 RSRC1Q96IZ7 334 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 C12orf66Q96MD2 445 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TBL1YQ9BQ87 522 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NUDT16L1Q9BRJ7 211 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PITPNM3Q9BZ71 974 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 OSBPL8Q9BZF1 889 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SLC25A51Q9H1U9 297 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ASB8Q9H765 288 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 COG4Q9H9E3 785 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 LZTFL1Q9NQ48 299 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 IL17CQ9P0M4 197 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 UVRAGQ9P2Y5 699 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CRLS1Q9UJA2 301 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 GUCA1BQ9UMX6 200 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NTNG1Q9Y2I2 539 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 MRPS2Q9Y399 296 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PPIL1Q9Y3C6 166 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 MN1Q10571 1320 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CR1P17927 2039 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 KALRNO60229 2985 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 AKAP6Q13023 2319 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 UBR5O95071 2799 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 YLPM1P49750 1951 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 LOC285095A0A1B0GVY8 99 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OR6C74A6NCV1 312 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PSMD11O00231 422 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 KLF11O14901 512 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CHUKO15111 745 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 STX7O15400 261 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 RRP8O43159 456 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NUDT21O43809 227 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 KHDRBS3O75525 346 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 SRP72O76094 671 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CDK14O94921 469 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 GOT2P00505 430 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 IFNB1P01574 187 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 GP1BAP07359 652 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CTNNA2P26232 953 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OTX2P32243 289 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FOXN2P32314 431 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 RPL22P35268 128 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NUDT1P36639 197 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 HSPA9P38646 679 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 RAD52P43351 418 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CAPZBP47756 277 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 DUSP3P51452 185 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 DCAF7P61962 342 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CDC20Q12834 499 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ILKQ13418 452 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 XRCC4Q13426 336 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TSTA3Q13630 321 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FASTKQ14296 549 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 GRB7Q14451 532 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NR1D2Q14995 579 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PDK1Q15118 436 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 E2F5Q15329 346 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TAF13Q15543 124 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF658BQ4V348 819 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FBXO48Q5FWF7 155 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TFDP3Q5H9I0 405 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CTSL3PQ5NE16 218 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 DCAF10Q5QP82 559 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 KCTD11Q693B1 232 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ADNP2Q6IQ32 1131 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 IYDQ6PHW0 289 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CNSTQ6PJW8 725 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 SARM1Q6SZW1 724 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FAM198BQ6UWH4 519 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM26Q6ZUK4 368 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 NCCRP1Q6ZVX7 275 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TAS2R42Q7RTR8 314 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PEX26Q7Z412 305 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ARHGAP22Q7Z5H3 698 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 PSTKQ8IV42 348 aaKnown RBP2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CFAP206Q8IYR0 622 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 BBS5Q8N3I7 341 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 TRAM1L1Q8N609 369 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 LINC01555Q8NAE3 123 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OR4E2Q8NGC2 313 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OR52E1Q8NGJ3 308 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 OR13J1Q8NGT2 312 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 FLVCR1-AS1Q8TAF5 88 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 KIAA1524Q8TCG1 905 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 P3H4Q92791 437 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 CXorf40BQ96DE9 158 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 C19orf60Q96EN9 201 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 C9orf72Q96LT7 481 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 C7orf26Q96N11 449 aa2.64□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF578Q96N58 590 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms