RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
LSM2-214ENST00000493387 SAMD4AQ9UPU9 718 aaKnown RBP10.55□□□□□ -0.72
LSM2-214ENST00000493387 SLC9A8Q9Y2E8 581 aa10.55□□□□□ -0.72
LSM2-214ENST00000493387 CSAG2Q9Y5P2 127 aa10.55□□□□□ -0.72
LSM2-214ENST00000493387 CENPVL1A0A0U1RR11 272 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 CFAP73A6NFT4 308 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 FAM47E-STBD1D6RA91 191 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 G3V3Y1 287 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 ADAM10O14672 748 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 LGI1O95970 557 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 SERPINA1P01009 418 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 CRYABP02511 175 aaKnown RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 UBTFL6P0CB48 400 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 UQCRBP14927 111 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 HOXB6P17509 224 aaKnown RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 MSX2P35548 267 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 P2RX1P51575 399 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 GPR85P60893 370 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 FOXO1Q12778 655 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 GANABQ14697 944 aaKnown RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 CD226Q15762 336 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 PLEKHN1Q494U1 663 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 FADS6Q8N9I5 356 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 FAM71CQ8NEG0 241 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 OR5W2Q8NH69 310 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 ARSGQ96EG1 525 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 JSRP1Q96MG2 331 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 DEPPQ9NTK1 212 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 DNAJB12Q9NXW2 375 aaKnown RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 TUBA8Q9NY65 449 aaPredicted RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 SLC7A8Q9UHI5 535 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 CARD8Q9Y2G2 431 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 MRPS18CQ9Y3D5 142 aaKnown RBP10.54□□□□□ -0.72
LSM2-214ENST00000493387 NINQ8N4C6 2090 aa10.54□□□□□ -0.72
LSM2-214ENST00000493387 FREM2Q5SZK8 3169 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 A0A087WZY1 265 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 A0A0G2JMM0 328 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 A0A1W2PPB8 328 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 A0A1W2PRS3 328 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 ANKUB1A6NFN9 424 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 AQP12BA6NM10 295 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 KIR3DP1A8MWS1 328 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 FAAHO00519 579 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 ACOT8O14734 319 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 GNB5O14775 395 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
LSM2-214ENST00000493387 CYP7B1O75881 506 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 GLSO94925 669 aaPredicted RBP10.53□□□□□ -0.72
LSM2-214ENST00000493387 ZNF682O95780 498 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 OPN1SWP03999 348 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 FESP07332 822 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 PGCP20142 388 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 CD247P20963 164 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 MS4A2Q01362 244 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 SKP2Q13309 424 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 CBFBQ13951 182 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 FLOT2Q14254 428 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 DUSP7Q16829 419 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 GLYR1Q49A26 553 aaPredicted RBP10.53□□□□□ -0.72
LSM2-214ENST00000493387 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 FKBP9P1Q75LS8 142 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 HMGN2P46Q86SG4 172 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 AQP12AQ8IXF9 295 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 C10orf67Q8IYJ2 551 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 CLIP4Q8N3C7 705 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 TMCO5AQ8N6Q1 288 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 OR2M3Q8NG83 312 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 TMEM234Q8WY98 164 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 CNOT9Q92600 299 aaKnown RBP10.53□□□□□ -0.72
LSM2-214ENST00000493387 TPD52L3Q96J77 140 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 TTTY12Q9BZ98 90 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 RTN4RQ9BZR6 473 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 DSN1Q9H410 356 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 MED11Q9P086 117 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 ANAPC2Q9UJX6 822 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 ICAM5Q9UMF0 924 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 POMPQ9Y244 141 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 C15orf41Q9Y2V0 281 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 PKD1L2Q7Z442 2459 aa10.53□□□□□ -0.72
LSM2-214ENST00000493387 TNRC6AQ8NDV7 1962 aaKnown RBP10.53□□□□□ -0.72
LSM2-214ENST00000493387 FRYQ5TBA9 3013 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 PINLYPA6NC86 204 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 LRRC3CA6NJW4 275 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 CLDN24A6NM45 220 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 TPST1O60507 370 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 FMO6PO60774 539 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 NUDT14O95848 222 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 LINGO3P0C6S8 592 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 UMPSP11172 480 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 NQO1P15559 274 aaKnown RBP10.52□□□□□ -0.73
LSM2-214ENST00000493387 SRD5A2P31213 254 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 CCR4P51679 360 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 ZNF41P51814 821 aaPredicted RBP10.52□□□□□ -0.73
LSM2-214ENST00000493387 CRYBA2P53672 197 aa10.52□□□□□ -0.73
LSM2-214ENST00000493387 DSCR4P56555 118 aaPredicted RBP10.52□□□□□ -0.73
LSM2-214ENST00000493387 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms