RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 LAMTOR4Q0VGL1 99 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ELAVL2Q12926 359 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MTAPQ13126 283 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TDGQ13569 410 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 PRSS53Q2L4Q9 553 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MPPE1Q53F39 396 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2G6Q5TZ20 316 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 EEF1DP3Q658K8 133 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF613Q6PF04 617 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 DNAJB7Q7Z6W7 309 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CFAP206Q8IYR0 622 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CARFQ8N187 725 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM130Q8N3G9 435 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TCEANCQ8N8B7 351 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RASGEF1AQ8N9B8 481 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF383Q8NA42 475 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RNF149Q8NC42 400 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF485Q8NCK3 441 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 LINC00116Q8NCU8 138 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OR5J2Q8NH18 312 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OR4L1Q8NH43 312 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 FAM151AQ8WW52 585 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ACOT11Q8WXI4 607 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 KCTD13Q8WZ19 329 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RNFT2Q96EX2 444 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MEGF10Q96KG7 1140 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF582Q96NG8 517 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 PANX1Q96RD7 426 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF559Q9BR84 538 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 GINS4Q9BRT9 223 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 FUZQ9BT04 418 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 DUSP26Q9BV47 211 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TM6SF2Q9BZW4 377 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 FXYD6Q9H0Q3 95 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 METTL9Q9H1A3 318 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TLNRD1Q9H1K6 362 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CHST8Q9H2A9 424 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 SARS2Q9NP81 518 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM138Q9NPI0 162 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CTPS2Q9NRF8 586 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CA10Q9NS85 328 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 SEMA3GQ9NS98 782 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 C19orf12Q9NSK7 152 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ACSS1Q9NUB1 689 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OSER1Q9NX31 292 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 FRRS1LQ9P0K9 344 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OPN4Q9UHM6 478 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MED16Q9Y2X0 877 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 DHRS7Q9Y394 339 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ENPP4Q9Y6X5 453 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 WDR90Q96KV7 1748 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 UBR3Q6ZT12 1888 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 SHROOM3Q8TF72 1996 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 GBF1Q92538 1859 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 C2orf78A6NCI8 922 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR6C74A6NCV1 312 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 BTBD17A6NE02 478 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ADARB2-AS1A8MUL3 147 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 BLOC1S5-TXNDC5H3BN57 136 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TLX2O43763 284 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GCM2O75603 506 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 REM1O75628 298 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GATBO75879 557 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 KLHL18O94889 574 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 APBB3O95704 486 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CRYABP02511 175 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR8U8P0C7N1 319 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 JMJD7P0C870 316 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF865P0CJ78 1059 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HIST1H1BP16401 226 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ADCYAP1P18509 176 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CD53P19397 219 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PRPS1L1P21108 318 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 IDSP22304 550 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CCR7P32248 378 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 THBS2P35442 1172 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CEACAM6P40199 344 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CXCR3P49682 368 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NDUFV1P49821 464 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PPT1P50897 306 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ART1P52961 327 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MVDP53602 400 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 C21orf58P58505 322 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 DAOAP59103 153 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 AP3S2P59780 193 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB8AP61006 207 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PPIAP62937 165 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 DGCR2P98153 550 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HMGCS1Q01581 520 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SP4Q02446 784 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FOXO1Q12778 655 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 BIKQ13323 160 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 IRF4Q15306 451 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF239Q16600 458 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC5A12Q1EHB4 618 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SYT14P1Q58G82 188 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 XKR6Q5GH73 641 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms