RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	TRIM2	Q9C040	744 aa		10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	GSTO2	Q9H4Y5	243 aa		10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	ESRP2	Q9H6T0	727 aa	Known RBP	10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	YAE1D1	Q9NRH1	226 aa		10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	GDF2	Q9UK05	429 aa	Predicted RBP	10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	STK38L	Q9Y2H1	464 aa		10.09	□□□□□ -0.79
SNU13-208	ENST00000488571	CAD	P27708	2225 aa		10.09	□□□□□ -0.79
SNU13-208	ENST00000488571		A0A096LNT2	108 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	DPRX	A6NFQ7	191 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	EFNA2	O43921	213 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	KCNK2	O95069	426 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	CD3E	P07766	207 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	LINGO3	P0C6S8	592 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	ACP2	P11117	423 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	PRPS2	P11908	318 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	SFTPD	P35247	375 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	ZNF41	P51814	821 aa	Predicted RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	BSPH1	Q075Z2	132 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	FAP	Q12884	760 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	HSPB3	Q12988	150 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	CD226	Q15762	336 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	EXOSC6	Q5RKV6	272 aa	Known RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	TIFAB	Q6ZNK6	161 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	IKBIP	Q70UQ0	350 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	TRABD2A	Q86V40	505 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	SLC22A9	Q8IVM8	553 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	TUSC5	Q8IXB3	177 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	CEP112	Q8N8E3	955 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	SLC16A11	Q8NCK7	471 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	FBXO30	Q8TB52	745 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	GTPBP3	Q969Y2	492 aa	Known RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	LRTM1	Q9HBL6	345 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	TNFRSF12A	Q9NP84	129 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	NTM	Q9P121	344 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	KLHL13	Q9P2N7	655 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	WBP11	Q9Y2W2	641 aa	Known RBP	10.08	□□□□□ -0.8
SNU13-208	ENST00000488571	CCL27	Q9Y4X3	112 aa		10.08	□□□□□ -0.8
SNU13-208	ENST00000488571		A0A1W2PP18	115 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	CCDC151	A5D8V7	595 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ZNF814	B7Z6K7	855 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	GPRIN2	O60269	458 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	RAMP1	O60894	148 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	IFNA2	P01563	188 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ME2	P23368	584 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	IL32	P24001	234 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	PRIM2	P49643	509 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	MANF	P55145	182 aa	Known RBP	10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	CARD18	P57730	90 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ETF1	P62495	437 aa	Known RBP	10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	FOXF1	Q12946	379 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	KIAA0040	Q15053	153 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	DUSP5	Q16690	384 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ZNF385B	Q569K4	471 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	TMEM201	Q5SNT2	666 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	PDSS1	Q5T2R2	415 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	GTF2IRD2B	Q6EKJ0	949 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ANKRD26P1	Q6NSI1	321 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	NOXRED1	Q6NXP6	359 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	SYT10	Q6XYQ8	523 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	GTF2IRD2	Q86UP8	949 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	DTX2	Q86UW9	622 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	LCA5	Q86VQ0	697 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	LILRA2	Q8N149	483 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	BANP	Q8N9N5	519 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	CDRT4	Q8N9R6	151 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	FAM76A	Q8TAV0	307 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	TMEM158	Q8WZ71	300 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	HSD17B8	Q92506	261 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ZNF764	Q96H86	408 aa	Predicted RBP	10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	ALG2	Q9H553	416 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	COQ10B	Q9H8M1	238 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	HHATL	Q9HCP6	504 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	MID1IP1	Q9NPA3	183 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	NGB	Q9NPG2	151 aa		10.07	□□□□□ -0.8
SNU13-208	ENST00000488571	YLPM1	P49750	1951 aa	Known RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571		A0A087WUV0	522 aa	Predicted RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	EXOC1L	A0A1B0GW35	172 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571		A0A1W2PQD3	144 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571		A8MV72	311 aa	Predicted RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	SHISA9	B4DS77	424 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	NPIPB8	E9PQR5	432 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	PDPK1	O15530	556 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	OIP5	O43482	229 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	RSL1D1	O76021	490 aa	Known RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	ADA	P00813	363 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	PABPC4L	P0CB38	370 aa	Known RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	EDNRA	P25101	427 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	ELK4	P28324	431 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	FRK	P42685	505 aa	Predicted RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	C21orf58	P58505	322 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	ZNF117	Q03924	483 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	ITGAD	Q13349	1161 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	P2RY6	Q15077	328 aa		10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	RNPS1	Q15287	305 aa	Known RBP	10.06	□□□□□ -0.8
SNU13-208	ENST00000488571	IMPG1	Q17R60	797 aa		10.06	□□□□□ -0.8

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