RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 METTL15A6NJ78 407 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 CLDN4O14493 209 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 FRS3O43559 492 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
HDAC6-230ENST00000488543 KCNK2O95069 426 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 SOX14O95416 240 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 DLGAP3O95886 979 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 GASTP01350 101 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 EMDP50402 254 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 HSD17B7P56937 341 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
HDAC6-230ENST00000488543 ZNF155Q12901 538 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-230ENST00000488543 ZNF404Q494X3 552 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 MED25Q71SY5 747 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
HDAC6-230ENST00000488543 TAGAPQ8N103 731 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 STX19Q8N4C7 294 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 POC5Q8NA72 575 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 AQP11Q8NBQ7 271 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 B3GNT7Q8NFL0 401 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 RIT1Q92963 219 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 PMEPA1Q969W9 287 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 KCNS3Q9BQ31 491 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 LMF2Q9BU23 707 aaKnown RBP11.26□□□□□ -0.61
HDAC6-230ENST00000488543 PRR14Q9BWN1 585 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 FOLH1BQ9HBA9 442 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 CCNB1IP1Q9NPC3 277 aa11.26□□□□□ -0.61
HDAC6-230ENST00000488543 COQ9O75208 318 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CDK1P06493 297 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 SSTR4P31391 388 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 TGM4P49221 684 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 SELENBP1Q13228 472 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 MAPK14Q16539 360 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 VWA2Q5GFL6 755 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 ARMCX4Q5H9R4 360 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 ZNF836Q6ZNA1 936 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 COX18Q8N8Q8 333 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 MVB12AQ96EY5 273 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 DGAT2Q96PD7 388 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 IL4I1Q96RQ9 567 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CDADC1Q9BWV3 514 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 SIDT1Q9NXL6 827 aaKnown RBP11.25□□□□□ -0.61
HDAC6-230ENST00000488543 KCNE5Q9UJ90 142 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 A0A1W2PRQ8 180 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 AGAP5A6NIR3 686 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CLDN24A6NM45 220 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CLCA1A8K7I4 914 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 EFCAB7A8K855 629 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 FAAHO00519 579 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 KIAA0513O60268 411 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CLPSP04118 112 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 GABRA3P34903 492 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 EFNA3P52797 238 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 EEF1A1P68104 462 aaKnown RBP11.25□□□□□ -0.61
HDAC6-230ENST00000488543 MED22Q15528 200 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 CSRP2Q16527 193 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 DCST1Q5T197 706 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 ZAR1Q86SH2 424 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 ZNF619Q8N2I2 560 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 AMER2Q8N7J2 671 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 SLC7A13Q8TCU3 470 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 GPR151Q8TDV0 419 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 IPCEF1Q8WWN9 437 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-230ENST00000488543 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-230ENST00000488543 C14orf119Q9NWQ9 140 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 DTX4Q9Y2E6 619 aa11.25□□□□□ -0.61
HDAC6-230ENST00000488543 PTPRZ1P23471 2315 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 STX11O75558 287 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 UGT2B17O75795 530 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 UPK1BO75841 260 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 OXSR1O95747 527 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 GP1BAP07359 652 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 THBS1P07996 1170 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 VAMP1P23763 118 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 CSTF2P33240 577 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 PPP5CP53041 499 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SMIM11AP58511 58 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 POU6F2P78424 691 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 PSG6Q00889 435 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 ACY1Q03154 408 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 GPR68Q15743 365 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 TSTQ16762 297 aaKnown RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 PGBD2Q6P3X8 592 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 PODNL1Q6PEZ8 512 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 FIGNL1Q6PIW4 674 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SHISA6Q6ZSJ9 500 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SLC46A3Q7Z3Q1 461 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 PEX5LQ8IYB4 626 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 RBM18Q96H35 190 aaKnown RBP11.24□□□□□ -0.61
HDAC6-230ENST00000488543 VSTM2LQ96N03 204 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SLC7A5P2Q9GIP4 190 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SIAEQ9HAT2 523 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 SLC22A11Q9NSA0 550 aa11.24□□□□□ -0.61
HDAC6-230ENST00000488543 IMPAD1Q9NX62 359 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms