RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TMPRSS11FQ6ZWK6 438 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 OR4D9Q8NGE8 314 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 BRIX1Q8TDN6 353 aaKnown RBP12.21□□□□□ -0.45
CPNE1-225ENST00000483495 ZNF721Q8TF20 911 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 TMEM80Q96HE8 168 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 LRR1Q96L50 414 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 SLC38A2Q96QD8 506 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 MKKSQ9NPJ1 570 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-225ENST00000483495 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 MED17Q9NVC6 651 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-225ENST00000483495 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 ADAMTS20P59510 1910 aa12.21□□□□□ -0.45
CPNE1-225ENST00000483495 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 CABIN1Q9Y6J0 2220 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 A0A1B0GWA3 101 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 CPED1A4D0V7 1026 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SERINC4A6NH21 518 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 EFCAB7A8K855 629 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 POLR1CO15160 346 aaPredicted RBP12.21□□□□□ -0.46
CPNE1-225ENST00000483495 NR4A1P22736 598 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.46
CPNE1-225ENST00000483495 RORAP35398 523 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 RBM34P42696 430 aaKnown RBP12.21□□□□□ -0.46
CPNE1-225ENST00000483495 CCL7P80098 99 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 ACY1Q03154 408 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 NNATQ16517 81 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 KLHL26Q53HC5 615 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 LINC00114Q6XXX2 140 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SLC46A3Q7Z3Q1 461 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 BCDIN3DQ7Z5W3 292 aaKnown RBP12.21□□□□□ -0.46
CPNE1-225ENST00000483495 ZNF614Q8N883 585 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 ZNF321PQ8N8H1 164 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 OR4Q3Q8NH05 313 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 OR4C3Q8NH37 302 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 TBC1D15Q8TC07 691 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SLC2A12Q8TD20 617 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 TEX12Q9BXU0 123 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 TGIF2Q9GZN2 237 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 TBC1D23Q9NUY8 699 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.46
CPNE1-225ENST00000483495 CLCA3PQ9Y6N3 262 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 LAMA1P25391 3075 aa12.21□□□□□ -0.46
CPNE1-225ENST00000483495 SDK1Q7Z5N4 2213 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 FRG2CA6NGY1 282 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 UNC119BA6NIH7 251 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 KDM4EB2RXH2 506 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-225ENST00000483495 SURF4O15260 269 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 PRODHO43272 600 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 IL33O95760 270 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 MAKP20794 623 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 ADH7P40394 386 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 GAS1P54826 345 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 OCA2Q04671 838 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 PGGHGQ32M88 737 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 VWA2Q5GFL6 755 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 PLPP5Q8NEB5 264 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 FAM71CQ8NEG0 241 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 OR14A16Q8NHC5 309 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 PFN4Q8NHR9 129 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 NAT6Q93015 286 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 ADIPOR1Q96A54 375 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 VN1R1Q9GZP7 353 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 GAREM1Q9H706 876 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 TAS2R16Q9NYV7 291 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 SLC35A3Q9Y2D2 325 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
CPNE1-225ENST00000483495 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
CPNE1-225ENST00000483495 NUP210LQ5VU65 1888 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 IGLV3-12A0A075B6K2 115 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 SNTNA6NMZ2 147 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 RPLP0P05388 317 aaKnown RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ZGLP1P0C6A0 271 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 IFI30P13284 250 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 TBXA2RP21731 343 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 FXYD6P3P58550 94 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 DCAF7P61962 342 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CLEC12AQ5QGZ9 265 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 FNDC7Q5VTL7 733 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 C1orf189Q5VU69 101 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 RPL13AP3Q6NVV1 102 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 SLC30A6Q6NXT4 461 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 COX15Q7KZN9 410 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CYP4Z2PQ8N1L4 340 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 OR2T33Q8NG76 320 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 DAZLQ92904 295 aaKnown RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LCORQ96JN0 433 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ART5Q96L15 291 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 DPH1Q9BZG8 443 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 OR8D2Q9GZM6 311 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 RACGAP1Q9H0H5 632 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms