RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	DNASE1L1	P49184	302 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GZMM	P51124	257 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF41	P51814	821 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRKAG1	P54619	331 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	RAC1	P63000	192 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GNGT1	P63211	74 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	KCNJ10	P78508	379 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	CDK6	Q00534	326 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FUT5	Q11128	374 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SELENBP1	Q13228	472 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	CBFB	Q13951	182 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	LARS2	Q15031	903 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MAPK11	Q15759	364 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ADRM1	Q16186	407 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PLPPR5	Q32ZL2	321 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GRAMD1B	Q3KR37	738 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FBXL19-AS1	Q494R0	122 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PAGE3	Q5JUK9	113 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GCNT6	Q5T4J0	391 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	WLS	Q5T9L3	541 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	RIPPLY2	Q5TAB7	128 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	NANOGP8	Q6NSW7	305 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	XKRX	Q6PP77	449 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC2A7	Q6PXP3	512 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	APOOL	Q6UXV4	268 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ESPNL	Q6ZVH7	1005 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SSX8	Q7RTT4	187 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF550	Q7Z398	422 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRICKLE2	Q7Z3G6	844 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	RETREG3	Q86VR2	466 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	IFNE	Q86WN2	208 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PTRH1	Q86Y79	214 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	LACC1	Q8IV20	430 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ACBD4	Q8NC06	268 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	HIPK4	Q8NE63	616 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	TNIP2	Q8NFZ5	429 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR6S1	Q8NH40	331 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR5W2	Q8NH69	310 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	B4GALNT2	Q8NHY0	566 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PIK3R3	Q92569	461 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	JADE3	Q92613	823 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	EFHD2	Q96C19	240 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	C16orf58	Q96GQ5	468 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MAGED4	Q96JG8	741 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	CCT8L2	Q96SF2	557 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF607	Q96SK3	696 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	INPP5K	Q9BT40	448 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	HES7	Q9BYE0	225 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MUC13	Q9H3R2	512 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ANKRA2	Q9H9E1	313 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	NANOG	Q9H9S0	305 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	RNF122	Q9H9V4	155 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	LIN28A	Q9H9Z2	209 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	KLHL1	Q9NR64	748 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC6A13	Q9NSD5	602 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ANKRD10	Q9NXR5	420 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	TES	Q9UGI8	421 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF232	Q9UNY5	417 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ANGPT4	Q9Y264	503 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC5A6	Q9Y289	635 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	L3MBTL1	Q9Y468	752 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SPIN1	Q9Y657	262 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PKDREJ	Q9NTG1	2253 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ADGRG4	Q8IZF6	3080 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525		A0A0G2JMM0	328 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	MYOCOS	A0A1B0GUC4	107 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525		A0A1W2PPB8	328 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525		A0A1W2PRS3	328 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRAMEF27	A3QJZ7	478 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	PINLYP	A6NC86	204 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	KIR3DP1	A8MWS1	328 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	MRAS	O14807	208 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	FCMR	O60667	390 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	BCAS1	O75363	584 aa	Predicted RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZIC2	O95409	532 aa	Predicted RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CNOT4	O95628	575 aa	Known RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CPSF4	O95639	269 aa	Known RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CSTA	P01040	98 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CHRM4	P08173	479 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	RFPL3S	P0C7P2	107 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	PABPC4L	P0CB38	370 aa	Known RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR12D1	P0DN82	309 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	NR2F1	P10589	423 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	THRB	P10828	461 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	COX4I1	P13073	169 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	HSD17B1	P14061	328 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRKCA	P17252	672 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	IL11	P20809	199 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	ACVR2A	P27037	513 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	DPP4	P27487	766 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CEACAM8	P31997	349 aa	Predicted RBP	4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC1A3	P43003	542 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	CRAT	P43155	626 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	LHX2	P50458	406 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	SEC24C	P53992	1094 aa		4.61	□□□□□ -1.67
HDAC6-223	ENST00000480525	MLLT10	P55197	1068 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms