RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 EID2BQ96D98 161 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 GULP1Q9UBP9 304 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 CAMK2AQ9UQM7 478 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 OR6C76A6NM76 312 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 INSIG1O15503 277 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 SLC25A12O75746 678 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 GBAP04062 536 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 LUMP51884 338 aaPredicted RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 PPIAP62937 165 aaKnown RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 EEF1A1P68104 462 aaKnown RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 XKR4Q5GH76 650 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 EEF1A1P5Q5VTE0 462 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 UQCC3Q6UW78 93 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 BEND4Q6ZU67 534 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 OR52I2Q8NH67 350 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 MRPL38Q96DV4 380 aaKnown RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 FCRL4Q96PJ5 515 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 TBX5Q99593 518 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 SLC38A1Q9H2H9 487 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 UFSP2Q9NUQ7 469 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 TDP1Q9NUW8 608 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 ZNF629Q9UEG4 869 aaPredicted RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 BACE2Q9Y5Z0 518 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 OR2T1O43869 369 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 BCHEP06276 602 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 VSIG10L2P0DP72 767 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 CCND3P30281 292 aaPredicted RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 TBX4P57082 545 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 ALKBH1Q13686 389 aaKnown RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 RNF212Q495C1 297 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 TMPRSS11BQ86T26 416 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 GAS2L1Q99501 681 aaPredicted RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 FAM117AQ9C073 453 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 ATG10Q9H0Y0 220 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 ACSS1Q9NUB1 689 aaPredicted RBP19.82■□□□□ 0.76
SDF4-206ENST00000478938 ASH2LQ9UBL3 628 aa19.82■□□□□ 0.76
SDF4-206ENST00000478938 GLTPD2A6NH11 291 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 ANKRD66B4E2M5 251 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 ACP5P13686 325 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 RPA2P15927 270 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 GALP22466 123 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 DDX6P26196 483 aaKnown RBP eCLIP19.81■□□□□ 0.76
SDF4-206ENST00000478938 MC1RQ01726 317 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 DCUN1D3Q8IWE4 304 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 SKA2Q8WVK7 121 aaPredicted RBP19.81■□□□□ 0.76
SDF4-206ENST00000478938 KLK11Q9UBX7 282 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 MYO10Q9HD67 2058 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 A0A1W2PPK0 400 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 C2orf74A8MZ97 194 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 H3BRB1 525 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 HYAL3O43820 417 aaPredicted RBP19.81■□□□□ 0.76
SDF4-206ENST00000478938 VEGFDO43915 354 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 RAD1O60671 282 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 ART1P52961 327 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 ELFN2Q5R3F8 820 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 NBPF12Q5TAG4 269 aaPredicted RBP19.81■□□□□ 0.76
SDF4-206ENST00000478938 CAMKMTQ7Z624 323 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 SKA3Q8IX90 412 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 SIRT6Q8N6T7 355 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 TMEM41AQ96HV5 264 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 TCEAL7Q9BRU2 100 aa19.81■□□□□ 0.76
SDF4-206ENST00000478938 PTPRDP23468 1912 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 COLCA2A8K830 154 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 KHDRBS3O75525 346 aaKnown RBP19.8■□□□□ 0.76
SDF4-206ENST00000478938 PAK4O96013 591 aaPredicted RBP19.8■□□□□ 0.76
SDF4-206ENST00000478938 ZNF44P15621 663 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 MGMTP16455 207 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 RIDAP52758 137 aaKnown RBP19.8■□□□□ 0.76
SDF4-206ENST00000478938 GMFBP60983 142 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 SLC3A1Q07837 685 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 REEP3Q6NUK4 255 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 FAM180BQ6P0A1 224 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 TMEM71Q6P5X7 295 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 ZNF783Q6ZMS7 281 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 MISPQ8IVT2 679 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 CFAP52Q8N1V2 620 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 ZSCAN1Q8NBB4 408 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 RHOVQ96L33 236 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 UCK1Q9HA47 277 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 CACYBPQ9HB71 228 aaKnown RBP19.8■□□□□ 0.76
SDF4-206ENST00000478938 C2orf42Q9NWW7 574 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 MEIS3P2A8K0S8 358 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 SNRPGP15A8MWD9 76 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 WASH3PC4AMC7 463 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 GFYI3L273 518 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 FMO6PO60774 539 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 UBXN7O94888 489 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 AHRP35869 848 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 ASMTP46597 345 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 KIAA1211LQ6NV74 962 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 SPON2Q9BUD6 331 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 TMEM231Q9H6L2 316 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 SPG21Q9NZD8 308 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 FBXL3Q9UKT7 428 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 DMRT1Q9Y5R6 373 aa19.8■□□□□ 0.76
SDF4-206ENST00000478938 HELZP42694 1942 aaKnown RBP19.79■□□□□ 0.76
SDF4-206ENST00000478938 IGLV3-10A0A075B6K4 115 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 H7C0S8 307 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 M0R3H8 397 aa19.79■□□□□ 0.76
SDF4-206ENST00000478938 PEA15Q15121 130 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms