RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 C9orf43Q8TAL5 461 aaPredicted RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 PTPMT1Q8WUK0 201 aaPredicted RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 TWIST2Q8WVJ9 160 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 METTL21AQ8WXB1 218 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 AKAP1Q92667 903 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS45-207ENST00000477558 TANKQ92844 425 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 TM4SF18Q96CE8 201 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 ZNF681Q96N22 645 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 LPAR4Q99677 370 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 BARD1Q99728 777 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 CCT7Q99832 543 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 SLC25A23Q9BV35 468 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 QTRT1Q9BXR0 403 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 LHPPQ9H008 270 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 CDCP1Q9H5V8 836 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 CCDC134Q9H6E4 229 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 RPF2Q9H7B2 306 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 TRIM45Q9H8W5 580 aaPredicted RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 COPS7BQ9H9Q2 264 aaPredicted RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 KCNK9Q9NPC2 374 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 MYNNQ9NPC7 610 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 PRTFDC1Q9NRG1 225 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 ARGLU1Q9NWB6 273 aaPredicted RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 TAS2R7Q9NYW3 318 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 RALYQ9UKM9 306 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 SLC12A4Q9UP95 1085 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 MRPS33Q9Y291 106 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 WBP11Q9Y2W2 641 aaKnown RBP4.81□□□□□ -1.64
VPS45-207ENST00000477558 TIMM22Q9Y584 194 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 PTGDR2Q9Y5Y4 395 aa4.81□□□□□ -1.64
VPS45-207ENST00000477558 C1orf226A1L170 272 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CGB1A6NKQ9 187 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CLDN4O14493 209 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ITM2AO43736 263 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 PCDH7O60245 1069 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 KLHL41O60662 606 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 B4GALT2O60909 372 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 SH3BGRLO75368 114 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 LYPLA1O75608 230 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 MYO1DO94832 1006 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 PSMG1O95456 288 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 GPR75O95800 540 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 GBAP04062 536 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ATP1B1P05026 303 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 KLK1P06870 262 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 SLC35E2P0CK97 266 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ICAM2P13598 275 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 NR1D1P20393 614 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 BGNP21810 368 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CPN2P22792 545 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 HMOX2P30519 316 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ARL1P40616 181 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 MAPK12P53778 367 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 OR4D2P58180 307 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 ABCE1P61221 599 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 FOLH1Q04609 750 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF763Q0D2J5 394 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 BST1Q10588 318 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 FUT7Q11130 342 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 PDE7AQ13946 482 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CHI3L2Q15782 390 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 TIGD6Q17RP2 521 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 SMU1Q2TAY7 513 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 SH2D4BQ5SQS7 431 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 TTC19Q6DKK2 380 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 FAM71E1Q6IPT2 247 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 KLHL17Q6TDP4 642 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 DGAT2L6Q6ZPD8 337 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 RGS9BPQ6ZS82 235 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 Q6ZS92 163 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 NUDCD3Q8IVD9 361 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 SLC44A2Q8IWA5 706 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 KIRREL3Q8IZU9 778 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CLYBLQ8N0X4 340 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 MMP21Q8N119 569 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF781Q8N8C0 355 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 MORN4Q8NDC4 146 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 B3GNT7Q8NFL0 401 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 OR8K3Q8NH51 312 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 OR14A16Q8NHC5 309 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF675Q8TD23 568 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF721Q8TF20 911 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 GLMPQ8WWB7 406 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 UCN3Q969E3 161 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 CNRIP1Q96F85 164 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 TRMT61AQ96FX7 289 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 MAELQ96JY0 434 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 C3orf30Q96M34 536 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 PELOQ9BRX2 385 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 NUAK2Q9H093 628 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 EML4Q9HC35 981 aaKnown RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZBTB20Q9HC78 741 aaPredicted RBP4.8□□□□□ -1.64
VPS45-207ENST00000477558 NMRK1Q9NWW6 199 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 C1orf109Q9NX04 203 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 AHSPQ9NZD4 102 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 HEY2Q9UBP5 337 aa4.8□□□□□ -1.64
VPS45-207ENST00000477558 ZNF639Q9UID6 485 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms