RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TP53BP1Q12888 1972 aaPredicted RBP17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 CTDSPLO15194 276 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 OR2A4O95047 310 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SIX6O95475 246 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 C1orf105O95561 183 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SERPIND1P05546 499 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 ADRB1P08588 477 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SAGP10523 405 aaPredicted RBP17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 MAOBP27338 520 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 RPL35P42766 123 aaKnown RBP17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 CTSOP43234 321 aaPredicted RBP17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 FUT5Q11128 374 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 PLD1Q13393 1074 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 TRAM2Q15035 370 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 NAXDQ8IW45 347 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 HMGB4Q8WW32 186 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SOCS4Q8WXH5 440 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 GIMAP5Q96F15 307 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 OR2A7Q96R45 310 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SLC22A12Q96S37 553 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 SGPP1Q9BX95 441 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 ARL6Q9H0F7 186 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 MED20Q9H944 212 aa17.34■□□□□ 0.37
ECHDC1-214ENST00000474289 DAPL1A0PJW8 107 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 IFNGR1P15260 489 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 FPR3P25089 353 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 ACVR1BP36896 505 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 FRKP42685 505 aaPredicted RBP17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 AKR1D1P51857 326 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 STXBP1P61764 594 aaKnown RBP17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 SNRPD1P62314 119 aaKnown RBP17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 LMAN2Q12907 356 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 C17orf99Q6UX52 265 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 RPTNQ6XPR3 784 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 ZNF620Q6ZNG0 422 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 RASGEF1AQ8N9B8 481 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 OR10H4Q8NGA5 316 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 C2orf15Q8WU43 125 aaKnown RBP17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 C12orf57Q99622 126 aa17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 EXOSC3Q9NQT5 275 aaKnown RBP17.33■□□□□ 0.37
ECHDC1-214ENST00000474289 A0A1W2PPK0 400 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 TBX6O95947 436 aaPredicted RBP17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 ALPPL2P10696 532 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 EPXP11678 715 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 HOXB1P14653 301 aaPredicted RBP17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 PPP3CBP16298 524 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 CD53P19397 219 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 GK2Q14410 553 aaPredicted RBP17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 ACSM3Q53FZ2 586 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 Q6ZVL8 140 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 HSD11B1LQ7Z5J1 315 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 NKAIN4Q8IVV8 208 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 OR2T33Q8NG76 320 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 BBS10Q8TAM1 723 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 DIO2Q92813 273 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 KAT2AQ92830 837 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 LRRC46Q96FV0 321 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 PGLYRP3Q96LB9 341 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 FERD3LQ96RJ6 166 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 ZNF304Q9HCX3 659 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 ABRACLQ9P1F3 81 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 ZMIZ1Q9ULJ6 1067 aa17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 GPR55Q9Y2T6 319 aaPredicted RBP17.33■□□□□ 0.36
ECHDC1-214ENST00000474289 CD70P32970 193 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 OR1D2P34982 312 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 STAT5AP42229 794 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 MELKQ14680 651 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 TRAM1Q15629 374 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 PABPC1L2AQ5JQF8 200 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 PDSS1Q5T2R2 415 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 NIPAL3Q6P499 406 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 LINGO2Q7L985 606 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 KCT2Q8NC54 265 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 ZDHHC1Q8WTX9 485 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 ELP4Q96EB1 424 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 FAM83CQ9BQN1 747 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 YIPF4Q9BSR8 244 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 ANKRD19PQ9H560 264 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 MPTX1A8MV57 137 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 LINC01387J3KSC0 135 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 SNAPC5O75971 98 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 MT-ND5P03915 603 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 ANXA7P20073 488 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 GCGRP47871 477 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 HOXA1P49639 335 aaPredicted RBP17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 GSG1LQ6UXU4 331 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 BAIAP2L2Q6UXY1 529 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 LRRTM4Q86VH4 590 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 NRMQ8IXM6 262 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 OR6V1Q8N148 313 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 OR5M9Q8NGP3 310 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 PPP1R16AQ96I34 528 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 CAMK1GQ96NX5 476 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 NDC1Q9BTX1 674 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 NOX3Q9HBY0 568 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 BCL2L10Q9HD36 194 aa17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 MTCL1Q9Y4B5 1905 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-214ENST00000474289 SIGLEC6O43699 453 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms