RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 DNPEPQ9ULA0 475 aa2.42□□□□□ -2.02
SSB-210ENST00000474273 PRPF19Q9UMS4 504 aaKnown RBP2.42□□□□□ -2.02
SSB-210ENST00000474273 PSG11Q9UQ72 335 aa2.42□□□□□ -2.02
SSB-210ENST00000474273 MAB21L2Q9Y586 359 aa2.42□□□□□ -2.02
SSB-210ENST00000474273 PSMB11A5LHX3 300 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 A8MUA0 341 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 K7N7A8 449 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 FOXH1O75593 365 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 CSF2P04141 144 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 ZNF44P15621 663 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 AQP1P29972 269 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 AKT2P31751 481 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 RABIFP47224 123 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 SUCLG1P53597 346 aaKnown RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 PVRIGQ6DKI7 326 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 SCYL2Q6P3W7 929 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 WDR74Q6RFH5 385 aaPredicted RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 TAF8Q7Z7C8 310 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 BATF2Q8N1L9 274 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 ZNF619Q8N2I2 560 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 MDS2Q8NDY4 140 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 DNAJA4Q8WW22 397 aaPredicted RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 OR1E3Q8WZA6 343 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 CCDC43Q96MW1 224 aaKnown RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 CTRCQ99895 268 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 RTBDNQ9BSG5 229 aaPredicted RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 TMEM121Q9BTD3 319 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 DBNDD1Q9H9R9 158 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 PAK1IP1Q9NWT1 392 aaPredicted RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 NINJ2Q9NZG7 142 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 KCNN3Q9UGI6 736 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 CRLS1Q9UJA2 301 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 ZNF225Q9UK10 706 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 PLA2G4CQ9UP65 541 aa2.41□□□□□ -2.02
SSB-210ENST00000474273 STRAPQ9Y3F4 350 aaKnown RBP2.41□□□□□ -2.02
SSB-210ENST00000474273 A0A1W2PQ67 120 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 A6NDX4 124 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 NPIPB7O75200 414 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 AKR7A3O95154 331 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 INSP01308 110 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 MMP1P03956 469 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 GCFC2P16383 781 aaKnown RBP2.4□□□□□ -2.03
SSB-210ENST00000474273 PRDX2P32119 198 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 CSNK1DP48730 415 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.03
SSB-210ENST00000474273 SNX1Q13596 522 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 TOR1AIP1Q5JTV8 583 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 RAB12Q6IQ22 244 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 ARSKQ6UWY0 536 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 ELMOD2Q8IZ81 293 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 FAM71E2Q8N5Q1 922 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 Q8N9W7 124 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 ZNF740Q8NDX6 193 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 ZNF721Q8TF20 911 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 TMEM186Q96B77 213 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 FEM1AQ9BSK4 669 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 SLC17A9Q9BYT1 436 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 POLR3FQ9H1D9 316 aaPredicted RBP2.4□□□□□ -2.03
SSB-210ENST00000474273 PPDPFQ9H3Y8 114 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 GPN2Q9H9Y4 310 aaPredicted RBP2.4□□□□□ -2.03
SSB-210ENST00000474273 SYTL2Q9HCH5 934 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 P2RX2Q9UBL9 471 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 USP16Q9Y5T5 823 aa2.4□□□□□ -2.03
SSB-210ENST00000474273 LOC100131303A0A0U1RQF7 123 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 WASHC1A8K0Z3 465 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ERVV-1B6SEH8 477 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 PTBP3O95758 552 aaKnown RBP2.39□□□□□ -2.03
SSB-210ENST00000474273 SLC4A1P02730 911 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 RALAP11233 206 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 RCC1P18754 421 aaPredicted RBP2.39□□□□□ -2.03
SSB-210ENST00000474273 XRCC1P18887 633 aaPredicted RBP2.39□□□□□ -2.03
SSB-210ENST00000474273 FUT1P19526 365 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 HLA-DPA1P20036 260 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 PRDX6P30041 224 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 EPHX2P34913 555 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 PAX5Q02548 391 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ST3GAL3Q11203 375 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 PDK1Q15118 436 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 NSDHLQ15738 373 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 TMEM52BQ4KMG9 183 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ETFRF1Q6IPR1 90 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 WDR88Q6ZMY6 472 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ARMCX2Q7L311 632 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ZNF429Q86V71 674 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 MINDY2Q8NBR6 621 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 STKLD1Q8NE28 680 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 OR8H1Q8NGG4 311 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 SLC13A3Q8WWT9 602 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ATP6V0A1Q93050 837 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 NCLNQ969V3 563 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 SRXN1Q9BYN0 137 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 HSD3B7Q9H2F3 369 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 ANO10Q9NW15 660 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 C1orf123Q9NWV4 160 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 UTP6Q9NYH9 597 aaKnown RBP2.39□□□□□ -2.03
SSB-210ENST00000474273 SPASTQ9UBP0 616 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 IL19Q9UHD0 177 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 BTNL2Q9UIR0 455 aa2.39□□□□□ -2.03
SSB-210ENST00000474273 NUDCQ9Y266 331 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms