RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SLC9B1Q4ZJI4 515 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 KLHL26Q53HC5 615 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 VWA1Q6PCB0 445 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 CBLN3Q6UW01 205 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 SPATA19Q7Z5L4 167 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 MTERF4Q7Z6M4 381 aaKnown RBP16.14■□□□□ 0.17
UPF3A-203ENST00000474056 GTPBP8Q8N3Z3 284 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-203ENST00000474056 VPS37AQ8NEZ2 397 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 FNDC9Q8TBE3 224 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 ZBTB8AQ96BR9 441 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 RNF145Q96MT1 663 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 RBM24Q9BX46 236 aaKnown RBP16.14■□□□□ 0.17
UPF3A-203ENST00000474056 CARD8Q9Y2G2 431 aa16.14■□□□□ 0.17
UPF3A-203ENST00000474056 DUXAA6NLW8 204 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 EIF1AYO14602 144 aaKnown RBP16.13■□□□□ 0.17
UPF3A-203ENST00000474056 C1QCP02747 245 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 OPN1LWP04000 364 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 LINGO3P0C6S8 592 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 RPS3AP61247 264 aaKnown RBP16.13■□□□□ 0.17
UPF3A-203ENST00000474056 FOXF1Q12946 379 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 SAXO2Q658L1 398 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 TNFAIP8L2Q6P589 184 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-203ENST00000474056 MAVSQ7Z434 540 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 MIPOL1Q8TD10 442 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 MAELQ96JY0 434 aaKnown RBP16.13■□□□□ 0.17
UPF3A-203ENST00000474056 ADGRG7Q96K78 797 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 MARK4Q96L34 752 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 DTNAQ9Y4J8 743 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 GPR45Q9Y5Y3 372 aa16.13■□□□□ 0.17
UPF3A-203ENST00000474056 CENPVL1A0A0U1RR11 272 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 C7orf72A4D263 438 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 SLCO1B7G3V0H7 640 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 KLF11O14901 512 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 AK1P00568 194 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 OR12D1P0DN82 309 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 EIF1AXP47813 144 aaKnown RBP16.12■□□□□ 0.17
UPF3A-203ENST00000474056 CPA2P48052 419 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 P2RX1P51575 399 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 GPR68Q15743 365 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 CTU2Q2VPK5 515 aaKnown RBP16.12■□□□□ 0.17
UPF3A-203ENST00000474056 ARHGAP11BQ3KRB8 267 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 PDZK1Q5T2W1 519 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 NXNQ6DKJ4 435 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 OR2A2Q6IF42 318 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 CDH24Q86UP0 819 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 CNEP1R1Q8N9A8 125 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 LINC01560Q8TB33 94 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 PIWIL2Q8TC59 973 aaKnown RBP16.12■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF75CPQ92670 426 aaPredicted RBP16.12■□□□□ 0.17
UPF3A-203ENST00000474056 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 CCDC115Q96NT0 180 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 SLC35A5Q9BS91 424 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 PIGMQ9H3S5 423 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 TMEM185BQ9H7F4 350 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 GALNT8Q9NY28 637 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 BTNL2Q9UIR0 455 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 KCNE5Q9UJ90 142 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 PACSIN3Q9UKS6 424 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 MKLN1Q9UL63 735 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 ICAM5Q9UMF0 924 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF175Q9Y473 711 aa16.12■□□□□ 0.17
UPF3A-203ENST00000474056 FREM1Q5H8C1 2179 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 TUBAL3A6NHL2 446 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 H3BNH8 94 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF195O14628 629 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 FCMRO60667 390 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 CTAG2O75638 210 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 AQP8O94778 261 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 NUDT14O95848 222 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 PGRP06401 933 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 CRHP06850 196 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 IL11P20809 199 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 KIR2DL2P43627 348 aaPredicted RBP16.11■□□□□ 0.17
UPF3A-203ENST00000474056 SUMO3P55854 103 aaPredicted RBP16.11■□□□□ 0.17
UPF3A-203ENST00000474056 RAC1P63000 192 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 SIRPAP78324 504 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 SORDQ00796 357 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 FUT5Q11128 374 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 TOMM34Q15785 309 aaPredicted RBP16.11■□□□□ 0.17
UPF3A-203ENST00000474056 SGCBQ16585 318 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 TTMPQ5BVD1 217 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 HEPHL1Q6MZM0 1159 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 PPP4R4Q6NUP7 873 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 C16orf62Q7Z3J2 963 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 KIF18BQ86Y91 864 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 OR10D3Q8NH80 312 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 RFWD2Q8NHY2 731 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 XAGE5Q8WWM1 108 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 RAB8BQ92930 207 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 NEURL3Q96EH8 262 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 GPATCH1Q9BRR8 931 aaKnown RBP16.11■□□□□ 0.17
UPF3A-203ENST00000474056 NMUR2Q9GZQ4 415 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF350Q9GZX5 532 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 RNF122Q9H9V4 155 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 STOML1Q9UBI4 398 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 ITGB1BP2Q9UKP3 347 aa16.11■□□□□ 0.17
UPF3A-203ENST00000474056 OTOGQ6ZRI0 2925 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 A0A0J9YW62 118 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 FAM221AA4D161 298 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 A8MXE2 369 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms