RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GXYLT1Q4G148 440 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 AP1ARQ63HQ0 302 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 AAGABQ6PD74 315 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 Q6ZPB1 254 aaPredicted RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 FJX1Q86VR8 437 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 CHERPQ8IWX8 916 aaKnown RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 C10orf111Q8N326 155 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 METTL25Q8N6Q8 603 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 CCDC197Q8NCU1 140 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 TOR1AIP2Q8NFQ8 470 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 NFKBIDQ8NI38 313 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 BBS10Q8TAM1 723 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 WDR60Q8WVS4 1066 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 TREX2Q9BQ50 279 aaPredicted RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 ECSITQ9BQ95 431 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 TMEM38AQ9H6F2 299 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 EFCAB1Q9HAE3 211 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ALKBH4Q9NXW9 302 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ESPL1Q14674 2120 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 A0A087WZY1 265 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CCL21O00585 134 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 NDUFAB1O14561 156 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 LRRTM2O43300 516 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ZIC3O60481 467 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 AGFG2O95081 481 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 PGM3O95394 542 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ACTL6AO96019 429 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
DDX56-209ENST00000473924 NID1P14543 1247 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 BMP7P18075 431 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 PRDX6P30041 224 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ADH7P40394 386 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CA7P43166 264 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 NUDT2P50583 147 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 SUMO3P55854 103 aaPredicted RBP11.26□□□□□ -0.61
DDX56-209ENST00000473924 RBBP4Q09028 425 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CBFBQ13951 182 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 LARS2Q15031 903 aaKnown RBP11.26□□□□□ -0.61
DDX56-209ENST00000473924 MAPK11Q15759 364 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 LIN52Q52LA3 116 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 RABL3Q5HYI8 236 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 REEP3Q6NUK4 255 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CBLN3Q6UW01 205 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ENPP6Q6UWR7 440 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ARSKQ6UWY0 536 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 KRT73Q86Y46 540 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 EID3Q8N140 333 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 C11orf65Q8NCR3 313 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 OR8J3Q8NGG0 315 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 OR10A6Q8NH74 314 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 TIMP4Q99727 224 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 PIGQQ9BRB3 760 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 UGT2B28Q9BY64 529 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 TP63Q9H3D4 680 aaPredicted RBP11.26□□□□□ -0.61
DDX56-209ENST00000473924 PIF1Q9H611 641 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ARMC7Q9H6L4 198 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 KAT8Q9H7Z6 458 aaKnown RBP11.26□□□□□ -0.61
DDX56-209ENST00000473924 PNPLA3Q9NST1 481 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 ANGPT4Q9Y264 503 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 DSPPQ9NZW4 1301 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 FREM3P0C091 2139 aa11.26□□□□□ -0.61
DDX56-209ENST00000473924 CLDN24A6NM45 220 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 FIGNL2A6NMB9 653 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 FXYD1O00168 92 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 OIP5O43482 229 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 CHMP24386 653 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 PGM1P36871 562 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 GFRA1P56159 465 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 CRYZQ08257 329 aaKnown RBP11.25□□□□□ -0.61
DDX56-209ENST00000473924 SKP2Q13309 424 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 GLYR1Q49A26 553 aaPredicted RBP11.25□□□□□ -0.61
DDX56-209ENST00000473924 NHSL2Q5HYW2 709 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 VASNQ6EMK4 673 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 ARPINQ7Z6K5 226 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 SERPINA11Q86U17 422 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 VRK2Q86Y07 508 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 PM20D2Q8IYS1 436 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 HIPK4Q8NE63 616 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 OR5M1Q8NGP8 315 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 OR5W2Q8NH69 310 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 BCAS4Q8TDM0 211 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 ZBTB8AQ96BR9 441 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms