RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 DGLUCYQ7Z3D6 616 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PXKQ7Z7A4 578 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OAFQ86UD1 273 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 TPRA1Q86W33 373 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OR4E2Q8NGC2 313 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OR52L1Q8NGH7 329 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 ZFPM2Q8WW38 1151 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 LCN9Q8WX39 176 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 JPH3Q8WXH2 748 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 GTPBP2Q9BX10 602 aaKnown RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PPIL3Q9H2H8 161 aaKnown RBP12.67□□□□□ -0.38
BRCA1-209ENST00000470026 FOLH1BQ9HBA9 442 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 TRIM36Q9NQ86 728 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 DUSP22Q9NRW4 184 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 TBC1D29Q9UFV1 150 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PCOLCE2Q9UKZ9 415 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SLC22A7Q9Y694 548 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 A0A087WV62 115 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 A0A0G2JK05 382 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 CDHR4A6H8M9 788 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 RCBTB2O95199 551 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 EML2O95834 649 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 APODP05090 189 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SLC2A5P22732 501 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PLA1AQ53H76 456 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 B3GLCTQ6Y288 498 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 GPALPP1Q8IXQ4 340 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PFN4Q8NHR9 129 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 PMM1Q92871 262 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 BADQ92934 168 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 STACQ99469 402 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SFXN1Q9H9B4 322 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 HAO2Q9NYQ3 351 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 MOSPD1Q9UJG1 213 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 SIGLEC7Q9Y286 467 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 TMEM5Q9Y2B1 443 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 COL4A2P08572 1712 aa12.67□□□□□ -0.38
BRCA1-209ENST00000470026 A0A0G2JMP0 313 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 LOC102723532A0A0G2JNH3 316 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 A0A0X1KG70 313 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 PRSS38A1L453 326 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 ZC3H12DA2A288 527 aaKnown RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 P2RX6O15547 441 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 DNAJB6O75190 326 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 PTP4A3O75365 173 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 STX11O75558 287 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 IFI30P13284 250 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 PRKCAP17252 672 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 FUT1P19526 365 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 NPR2P20594 1047 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SHC1P29353 583 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 RBMS1P29558 406 aaKnown RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SOX9P48436 509 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SIM1P81133 766 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 FOXK2Q01167 660 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 PLAURQ03405 335 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 TRMT12Q53H54 448 aaKnown RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 DCST2Q5T1A1 773 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 CCNJQ5T5M9 372 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 IDNKQ5T6J7 187 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 TEX19Q8NA77 164 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SLC37A3Q8NCC5 494 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 COL26A1Q96A83 441 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SLC22A18Q96BI1 424 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 TEAD3Q99594 435 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 MED20Q9H944 212 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 IL21RQ9HBE5 538 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 ATP13A2Q9NQ11 1180 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF624Q9P2J8 865 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 MKI67P46013 3256 aaKnown RBP12.66□□□□□ -0.38
BRCA1-209ENST00000470026 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
BRCA1-209ENST00000470026 TBC1D3EA0A087X179 549 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 DAPL1A0PJW8 107 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 MT-ND5P03915 603 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ATP1B1P05026 303 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 TFPIP10646 304 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 IL9P15248 144 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 BMP7P18075 431 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 TLX1P31314 330 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 CAPZA2P47755 286 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 TAS2R43P59537 309 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 KIAA1024LP59773 190 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 GPR176Q14439 515 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms