RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 RBM4Q9BWF3 364 aaKnown RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 TRIM2Q9C040 744 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 LHPPQ9H008 270 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 HHATLQ9HCP6 504 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 EXOSC3Q9NQT5 275 aaKnown RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 A4GNTQ9UNA3 340 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ORC6Q9Y5N6 252 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 LYVE1Q9Y5Y7 322 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 FAM186AA6NE01 2351 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 FAAHO00519 579 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 SOCS2O14508 198 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 HCRTR2O43614 444 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 FADS1O60427 444 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 EIF4E2O60573 245 aaKnown RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 BCAS1O75363 584 aaPredicted RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 OR6B1O95007 311 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 CCNB2O95067 398 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 RASAL1O95294 804 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 NUDT14O95848 222 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 PRG2P13727 222 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 RYKP34925 604 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 SLC6A8P48029 635 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 HSPA13P48723 471 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ZNF136P52737 540 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 CDC20Q12834 499 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 EPS8Q12929 822 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 DAG1Q14118 895 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 TRAM2Q15035 370 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 OR1Q1Q15612 314 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ACER2Q5QJU3 275 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 DCST1Q5T197 706 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 FNDC7Q5VTL7 733 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 B3GNTL1Q67FW5 361 aaPredicted RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 GPALPP1Q8IXQ4 340 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 TOR1AIP2Q8NFQ8 470 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 OR10G2Q8NGC3 310 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 GRHL3Q8TE85 626 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 GIPC3Q8TF64 312 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ALPK1Q96QP1 1244 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 OSBPL11Q9BXB4 747 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 LAT2Q9GZY6 243 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 GABARAPL1Q9H0R8 117 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 NMNAT1Q9HAN9 279 aaPredicted RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 ACAD8Q9UKU7 415 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 CNOT11Q9UKZ1 510 aaKnown RBP11.12□□□□□ -0.63
VPS16-206ENST00000466415 POLHQ9Y253 713 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 CARD8Q9Y2G2 431 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 NTNG1Q9Y2I2 539 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 MSRB2Q9Y3D2 182 aa11.12□□□□□ -0.63
VPS16-206ENST00000466415 GVINP1Q7Z2Y8 2422 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF292O60281 2723 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 FFAR1O14842 300 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 NKX2-8O15522 239 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 KLK10O43240 276 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 MAN1A2O60476 641 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 TPST2O60704 377 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 HPRP00739 348 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 THRBP10828 461 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ELAVL4P26378 380 aaKnown RBP11.11□□□□□ -0.63
VPS16-206ENST00000466415 ITPKBP27987 946 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 HTR2AP28223 471 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ID4P47928 161 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ALDH3A2P51648 485 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 AQP4P55087 323 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 IL1RL1Q01638 556 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF117Q03924 483 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 SKP2Q13309 424 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF791Q3KP31 576 aaPredicted RBP11.11□□□□□ -0.63
VPS16-206ENST00000466415 PPP4R4Q6NUP7 873 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 H3F3CQ6NXT2 135 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 APOOLQ6UXV4 268 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 RRM2BQ7LG56 351 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 TMEM179BQ7Z7N9 219 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 HS3ST5Q8IZT8 346 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 CYP4Z2PQ8N1L4 340 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ARMC10Q8N2F6 343 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 LINC00471Q8N535 108 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 FAM71CQ8NEG0 241 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 OR4C15Q8NGM1 316 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF563Q8TA94 476 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 MAGEE2Q8TD90 523 aaPredicted RBP11.11□□□□□ -0.63
VPS16-206ENST00000466415 DNAJC9Q8WXX5 260 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
VPS16-206ENST00000466415 SECISBP2Q96T21 854 aaKnown RBP11.11□□□□□ -0.63
VPS16-206ENST00000466415 ZNF184Q99676 751 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms