RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TMED1Q13445 227 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 OR1Q1Q15612 314 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 OCLNQ16625 522 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 SYT14P1Q58G82 188 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 VWA2Q5GFL6 755 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 RASSF6Q6ZTQ3 369 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 MBOAT2Q6ZWT7 520 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 SLC46A3Q7Z3Q1 461 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 ZNF321PQ8N8H1 164 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 OR2I1PQ8NGU4 316 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 SENP5Q96HI0 755 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-205ENST00000466192 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-205ENST00000466192 Q9N2J8 555 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 TRAPPC13A5PLN9 417 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 A8MUA0 341 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 PATE3B3GLJ2 98 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 PRKNO60260 465 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-205ENST00000466192 LYPD3O95274 346 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-205ENST00000466192 ANKDD1AQ495B1 522 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 PEAR1Q5VY43 1037 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-205ENST00000466192 WDR88Q6ZMY6 472 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 QSOX2Q6ZRP7 698 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 ZSCAN1Q8NBB4 408 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 TOR1AIP2Q8NFQ8 470 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 FNDC8Q8TC99 324 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 DYNC2LI1Q8TCX1 351 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 DPYSL5Q9BPU6 564 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 CLEC2DQ9UHP7 191 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 GPR52Q9Y2T5 361 aa16.87■□□□□ 0.29
COL9A3-205ENST00000466192 BDP1A6H8Y1 2624 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 A0A1B0GX78 115 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 NPIPB9F8W1W9 429 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 TOX3O15405 576 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-205ENST00000466192 NADKO95544 446 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-205ENST00000466192 GRK5P34947 590 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 RGS6P49758 472 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 CCL7P80098 99 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 EFNB1P98172 346 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 SQSTM1Q13501 440 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 DOC2BQ14184 412 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 ZNF367Q7RTV3 350 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 SLC34A3Q8N130 599 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 SLC15A4Q8N697 577 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 BCORP1Q8N888 145 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 CLIP3Q96DZ5 547 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 ZHX1-C8orf76Q96EF9 292 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 TMEM80Q96HE8 168 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 POLR2J2Q9GZM3 115 aaKnown RBP16.86■□□□□ 0.29
COL9A3-205ENST00000466192 TESQ9UGI8 421 aaKnown RBP16.86■□□□□ 0.29
COL9A3-205ENST00000466192 CBLCQ9ULV8 474 aa16.86■□□□□ 0.29
COL9A3-205ENST00000466192 AGRPO00253 132 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 KLF4O43474 513 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 FMO6PO60774 539 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ADAM11O75078 769 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 CKMT1AP12532 417 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 FPR3P25089 353 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 SLC37A1P57057 533 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 RHAGQ02094 409 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 MEDAGQ5VYS4 303 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 SLC30A6Q6NXT4 461 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 TMEM151BQ8IW70 566 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 EID2Q8N6I1 236 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 POGLUT1Q8NBL1 392 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ZNF582Q96NG8 517 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-205ENST00000466192 MGLLQ99685 303 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 PRODH2Q9UF12 536 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 IL20RAQ9UHF4 553 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 OR10H1Q9Y4A9 318 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 LOC100506127A0A0U1RQW1 187 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 CDC42EP2O14613 210 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 CH25HO95992 272 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 RPLP0P05388 317 aaKnown RBP16.85■□□□□ 0.29
COL9A3-205ENST00000466192 OPRL1P41146 370 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 NCF4Q15080 339 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ZNF141Q15928 474 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 DGUOKQ16854 277 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ARHGAP40Q5TG30 622 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 FAM181AQ8N9Y4 354 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ZBTB8BQ8NAP8 495 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-205ENST00000466192 OR7G1Q8NGA0 311 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 BORCS5Q969J3 196 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
COL9A3-205ENST00000466192 LMF1Q96S06 567 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 G6PC3Q9BUM1 346 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 OR51E2Q9H255 320 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 TBC1D23Q9NUY8 699 aa16.85■□□□□ 0.29
COL9A3-205ENST00000466192 DNAJB12Q9NXW2 375 aaKnown RBP16.85■□□□□ 0.29
COL9A3-205ENST00000466192 A0A0C4DFX4 3053 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 J3QRK9 145 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 CSTF2P33240 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL9A3-205ENST00000466192 SOWAHCQ53LP3 525 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-205ENST00000466192 SLC25A30Q5SVS4 291 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 YOD1Q5VVQ6 348 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-205ENST00000466192 ADCK1Q86TW2 530 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 LAPTM4BQ86VI4 370 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 GRAMD2AQ8IUY3 354 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 PRSS58Q8IYP2 241 aa16.84■□□□□ 0.29
COL9A3-205ENST00000466192 FGF11Q92914 225 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms