RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 HBA1P69905 142 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 OLR1P78380 273 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 BNIP2Q12982 314 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 LARS2Q15031 903 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 GARNL3Q5VVW2 1013 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 NIPAL1Q6NVV3 410 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 FAM180BQ6P0A1 224 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SLC48A1Q6P1K1 146 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 DHFR2Q86XF0 187 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CA13Q8N1Q1 262 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TRIML2Q8N7C3 387 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TTC29Q8NA56 475 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SEMA6DQ8NFY4 1073 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 OR4D9Q8NGE8 314 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 OR9A4Q8NGU2 314 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 OR10A6Q8NH74 314 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SLC26A7Q8TE54 656 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 FAM120BQ96EK7 910 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ZBED6CLQ96FA7 236 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CNDP2Q96KP4 475 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF583Q96ND8 569 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 BBS4Q96RK4 519 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 NPLQ9BXD5 320 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 IKZF5Q9H5V7 419 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 RPF2Q9H7B2 306 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 KAT8Q9H7Z6 458 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 DCLRE1BQ9H816 532 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TPT1P8Q9HAU6 139 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 LYRM4Q9HD34 91 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ACSS1Q9NUB1 689 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TAS2R9Q9NYW1 312 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CES1P1Q9UKY3 287 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 DAPP1Q9UN19 280 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF780BQ9Y6R6 833 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SPACA6W5XKT8 324 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 NCOR2Q9Y618 2525 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ASCC3Q8N3C0 2202 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 A0A0A6YYC8 382 aaPredicted RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 IGHV5-10-1A0A0J9YXX1 117 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 LNP1A1A4G5 178 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 MYO1GB0I1T2 1018 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 I3L1I5 382 aaPredicted RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SYT5O00445 386 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FLRT2O43155 660 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CHST10O43529 356 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FKBP6O75344 327 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 RDH16O75452 317 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR2B3O76000 313 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 KRT36O76013 467 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 PSMG1O95456 288 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ANKRD34CP0C6C1 535 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 C8orf89P0DMQ9 161 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FOLR1P15328 257 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CKMT2P17540 419 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GPX2P18283 190 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CSNK2A2P19784 350 aaPredicted RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 UQCRC2P22695 453 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 NTSP30990 170 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SOAT1P35610 550 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SERPINF1P36955 418 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FEN1P39748 380 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GZMMP51124 257 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 NCBP2P52298 156 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 RAB38P57729 211 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR4D2P58180 307 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SKP1P63208 163 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 TNFRSF17Q02223 184 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SLC14A1Q13336 389 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GAB1Q13480 694 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 BLMHQ13867 455 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FAM53BQ14153 422 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SF3A2Q15428 464 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CLPPQ16740 277 aaPredicted RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GLYATQ6IB77 296 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 AAGABQ6PD74 315 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF66Q6ZN08 573 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ARHGAP22Q7Z5H3 698 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SPATA24Q86W54 205 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CALHM3Q86XJ0 350 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CLEC4FQ8N1N0 589 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 TNIP2Q8NFZ5 429 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR2T12Q8NG77 320 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR4K14Q8NGD5 310 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR5T3Q8NGG3 340 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 OR1L3Q8NH93 324 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ZFP90Q8TF47 636 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 DDB2Q92466 427 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 C10orf90Q96M02 699 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 AMDHD1Q96NU7 426 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 FYTTD1Q96QD9 318 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GFM1Q96RP9 751 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SLC35A5Q9BS91 424 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 TRIM15Q9C019 465 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 MUC13Q9H3R2 512 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GLIPR2Q9H4G4 154 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SYNDIG1Q9H7V2 258 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 CLK4Q9HAZ1 481 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 RXFP3Q9NSD7 469 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GIMAP4Q9NUV9 329 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms