RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 BBS4Q96RK4 519 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 HES7Q9BYE0 225 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 ZNF350Q9GZX5 532 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 PAIP1Q9H074 479 aaKnown RBP5.24□□□□□ -1.57
VPS36-202ENST00000462289 MYLK2Q9H1R3 596 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 PIGUQ9H490 435 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 IL1RL2Q9HB29 575 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 SAR1AQ9NR31 198 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 QPCTLQ9NXS2 382 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 SLC25A37Q9NYZ2 338 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 SH3BP4Q9P0V3 963 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 ABCG2Q9UNQ0 655 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 ZNF835Q9Y2P0 537 aa5.24□□□□□ -1.57
VPS36-202ENST00000462289 KLF13Q9Y2Y9 288 aaPredicted RBP5.24□□□□□ -1.57
VPS36-202ENST00000462289 MRPS18CQ9Y3D5 142 aaKnown RBP5.24□□□□□ -1.57
VPS36-202ENST00000462289 A0A096LPI6 279 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 A0A1W2PP18 115 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 A0A1W2PQD3 144 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 PINLYPA6NC86 204 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 A8MUI8 341 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 A8MVJ9 347 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CAPN14A8MX76 684 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ALG1L2C9J202 215 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ACOT7O00154 380 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 NME6O75414 186 aaPredicted RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 WISP2O76076 250 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 KCNK2O95069 426 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 C1QCP02747 245 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 PLA2G2AP14555 144 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 GPX2P18283 190 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CNR1P21554 472 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 RPS4Y1P22090 263 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 UQCRC2P22695 453 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 MST1P26927 711 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 S100A3P33764 101 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CASP3P42574 277 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CDKN2CP42773 168 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CCT3P49368 545 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 TMED10P49755 219 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 NR0B1P51843 470 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 POLR2JP52435 117 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 DGKQP52824 942 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ARG2P78540 354 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 MRPS22P82650 360 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 HSPB3Q12988 150 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 EFR3AQ14156 821 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 MAPKAPK3Q16644 382 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 TMEM44Q2T9K0 475 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 PRR30Q53SZ7 412 aaPredicted RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 CMPK2Q5EBM0 449 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 NHSL2Q5HYW2 709 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 APOOLQ6UXV4 268 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 Q6ZPB1 254 aaPredicted RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 GALNTL5Q7Z4T8 443 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 FGD2Q7Z6J4 655 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 TAGAPQ8N103 731 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 STPG3Q8N7X2 389 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 BCORP1Q8N888 145 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 FADS6Q8N9I5 356 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 TEX19Q8NA77 164 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ST6GALNAC3Q8NDV1 305 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 FAM71CQ8NEG0 241 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 OR2M7Q8NG81 312 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 OR10G3Q8NGC4 313 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 OR4N2Q8NGD1 307 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 GRHL3Q8TE85 626 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 DOK4Q8TEW6 326 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 DYDC1Q8WWB3 177 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ASB15Q8WXK1 588 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 PMM1Q92871 262 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 TMBIM1Q969X1 311 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 OMA1Q96E52 524 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 FAM173AQ9BQD7 235 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 INPP5KQ9BT40 448 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 BTBD2Q9BX70 525 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 TMEM120AQ9BXJ8 343 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 RSPO3Q9BXY4 272 aaPredicted RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 ACTRT3Q9BYD9 372 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 RTN4RQ9BZR6 473 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 NMUR2Q9GZQ4 415 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 RABEP2Q9H5N1 569 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ZNF703Q9H7S9 590 aaPredicted RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 LIN28AQ9H9Z2 209 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 C3orf14Q9HBI5 128 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ACKR4Q9NPB9 350 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 POLE3Q9NRF9 147 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 ZCCHC3Q9NUD5 404 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 DDX18Q9NVP1 670 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 HPF1Q9NWY4 346 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 PRDM4Q9UKN5 801 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 CBLCQ9ULV8 474 aa5.23□□□□□ -1.57
VPS36-202ENST00000462289 FLNBO75369 2602 aaKnown RBP5.23□□□□□ -1.57
VPS36-202ENST00000462289 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 ANKHD1Q8IWZ3 2542 aaKnown RBP5.22□□□□□ -1.57
VPS36-202ENST00000462289 GXYLT2A0PJZ3 443 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 WIPF3A6NGB9 483 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 CCDC154A6NI56 674 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 C9JVG2 144 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 KLRC4-KLRK1H3BQV0 150 aa5.22□□□□□ -1.57
VPS36-202ENST00000462289 HMGN4O00479 90 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms