RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TREX2Q9BQ50 279 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ELAC2Q9BQ52 826 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF350Q9GZX5 532 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SLC52A3Q9NQ40 469 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SLC6A13Q9NSD5 602 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CALML5Q9NZT1 146 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 STOML1Q9UBI4 398 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 P2RX2Q9UBL9 471 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 Q9UFV3 132 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MKLN1Q9UL63 735 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MYO9AB2RTY4 2548 aa12.01□□□□□ -0.49
RAB11FIP3-207ENST00000461009 PKDREJQ9NTG1 2253 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 A0A087WZY1 265 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LINC01387J3KSC0 135 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SLC22A2O15244 555 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 FCMRO60667 390 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 EPPINO95925 133 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 HK1P19367 917 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LSP1P33241 339 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 DSTNP60981 165 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GNGT1P63211 74 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TFF3Q07654 80 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 FADDQ13158 208 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF141Q15928 474 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MMEL1Q495T6 779 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NHSL2Q5HYW2 709 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 COX20Q5RI15 118 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 VASNQ6EMK4 673 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ENPP6Q6UWR7 440 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LRRC74BQ6ZQY2 392 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 IFNEQ86WN2 208 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LACC1Q8IV20 430 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF614Q8N883 585 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GATSQ8NAP1 163 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 B4GALNT2Q8NHY0 566 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 C10orf82Q8WW14 230 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TIMP4Q99727 224 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 RTN4RQ9BZR6 473 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SAP130Q9H0E3 1048 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MTHFD2LQ9H903 347 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CACYBPQ9HB71 228 aaKnown RBP12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SAR1AQ9NR31 198 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SLC6A5Q9Y345 797 aa12□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NPIPA5A0A0B4J1W7 369 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NPIPA7E9PJI5 369 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NPIPB9F8W1W9 429 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 HCRTR2O43614 444 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZIC3O60481 467 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 EIF4E2O60573 245 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 H6PDO95479 791 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NPIPA8P0DM63 369 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ETFAP13804 333 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 IGFBP2P18065 325 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 BMP7P18075 431 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CHMP24386 653 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TIMP3P35625 211 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ADH7P40394 386 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SEC24CP53992 1094 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GYS2P54840 703 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CRYZQ08257 329 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 KLF10Q13118 480 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 RGNQ15493 299 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SYPL1Q16563 259 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GTDC1Q4AE62 458 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 PDZK1Q5T2W1 519 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 EIF3MQ7L2H7 374 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TMEM200AQ86VY9 491 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF619Q8N2I2 560 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 DPP10Q8N608 796 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 C1GALT1C1Q96EU7 318 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 AURKBQ96GD4 344 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SFXN2Q96NB2 322 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 PIGQQ9BRB3 760 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 FAM107BQ9H098 131 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF629Q9UEG4 869 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 RPH3AQ9Y2J0 694 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GMEB1Q9Y692 573 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CAPN7Q9Y6W3 813 aa11.99□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 BBIP1A8MTZ0 92 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF264O43296 627 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 KIAA0513O60268 411 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 UGT2B17O75795 530 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NUDT14O95848 222 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 UBL4AP11441 157 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 P2RX1P51575 399 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZNF41P51814 821 aaPredicted RBP11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CRISP3P54108 245 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 SUMO3P55854 103 aaPredicted RBP11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CHRNEQ04844 493 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 NFYCQ13952 458 aa11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CYLC2Q14093 348 aaPredicted RBP11.98□□□□□ -0.49
RAB11FIP3-207ENST00000461009 CD226Q15762 336 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms