RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 VSTM2LQ96N03 204 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 WFDC6Q9BQY6 131 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 TSSK6Q9BXA6 273 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 FGF20Q9NP95 211 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CHCHD3Q9NX63 227 aaKnown RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 EXOSC1Q9Y3B2 195 aaKnown RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 IGSF10Q6WRI0 2623 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 EFCAB7A8K855 629 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MYL12BO14950 172 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 HYAL3O43820 417 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MAN1A2O60476 641 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 IGF2P01344 180 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 SCG5P05408 212 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 GNSP15586 552 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF12P17014 697 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MYL12AP19105 171 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 S1PR1P21453 382 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 RGS6P49758 472 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 CTBP2P56545 445 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 DCAF7P61962 342 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 ID2Q02363 134 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 PRKCDQ05655 676 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 BNIP3Q12983 259 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-205ENST00000460485 SYT14P1Q58G82 188 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 ARMCX4Q5H9R4 360 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM236Q5W0B7 351 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 TUBA3EQ6PEY2 450 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 LSMEM1Q8N8F7 131 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MMABQ96EY8 250 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-205ENST00000460485 TGM7Q96PF1 710 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MGLLQ99685 303 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 RHNO1Q9BSD3 238 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 ALOXE3Q9BYJ1 711 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 MMP27Q9H306 513 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 TVP23BQ9NYZ1 205 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 SELENONQ9NZV5 590 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 AASSQ9UDR5 926 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 SLC35A3Q9Y2D2 325 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 GPR55Q9Y2T6 319 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-205ENST00000460485 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
ERCC3-205ENST00000460485 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 IGHV1OR21-1A0A087WYE8 117 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM129A0AVI4 362 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 M0R082 166 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 TPST2O60704 377 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 CT62P0C5K7 136 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 PPM1FP49593 454 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 EMDP50402 254 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 COPZ1P61923 177 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 PSG6Q00889 435 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 FGFBP1Q14512 234 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 EXOSC7Q15024 291 aaKnown RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 OR1Q1Q15612 314 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 CLPPQ16740 277 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 DEFB133Q30KQ1 61 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 TMPRSS11FQ6ZWK6 438 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SFTPA2Q8IWL1 248 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 NRMQ8IXM6 262 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 GPR135Q8IZ08 494 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 D2HGDHQ8N465 521 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF527Q8NB42 609 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 OR51Q1Q8NH59 317 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 FGF11Q92914 225 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 FAM46AQ96IP4 442 aaKnown RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-205ENST00000460485 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 ANKRA2Q9H9E1 313 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 STARD5Q9NSY2 213 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 CUTCQ9NTM9 273 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 KLK13Q9UKR3 277 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 SRPK3Q9UPE1 567 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
ERCC3-205ENST00000460485 ASXL3Q9C0F0 2248 aa13.04□□□□□ -0.32
ERCC3-205ENST00000460485 A0A0B4J2E0 115 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms