RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 XCR1P46094 333 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 FNTAP49354 379 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 ACADVLP49748 655 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 EMDP50402 254 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 SLC25A1P53007 311 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 NAPAP54920 295 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 POLR2FP61218 127 aaKnown RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 PUDPQ08623 228 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 CYP51A1Q16850 503 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 PAN3Q58A45 887 aaKnown RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 RIPPLY2Q5TAB7 128 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 SLX4IPQ5VYV7 408 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 PVRIGQ6DKI7 326 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 VITQ6UXI7 678 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 CYS1Q717R9 158 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 ZNF573Q86YE8 665 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 GRAMD2AQ8IUY3 354 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 C9orf40Q8IXQ3 194 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 GPR65Q8IYL9 337 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 GPR137CQ8N3F9 429 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 BPIFB2Q8N4F0 458 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 FADS6Q8N9I5 356 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 STKLD1Q8NE28 680 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 ARNTL2Q8WYA1 636 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 C18orf25Q96B23 403 aaPredicted RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 DHTKD1Q96HY7 919 aaPredicted RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 HPDLQ96IR7 371 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 C16orf45Q96MC5 204 aaPredicted RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 DPH7Q9BTV6 452 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 PAXXQ9BUH6 204 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 DPH5Q9H2P9 285 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 RWDD1Q9H446 243 aaPredicted RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 RSPH14Q9UHP6 348 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 CYTH4Q9UIA0 394 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 COL22A1Q8NFW1 1626 aaPredicted RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 ERVK-7P63135 1459 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 PLEKHH2Q8IVE3 1493 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 GOLGB1Q14789 3259 aaKnown RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 LRPPRCP42704 1394 aaKnown RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 PIK3R4Q99570 1358 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CROCC2H7BZ55 1655 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 FAM168BA1KXE4 195 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CASKO14936 926 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CTAGE5O15320 804 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 GPAA1O43292 621 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 NUDT21O43809 227 aaKnown RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 DUX1O43812 170 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 HEXBP07686 556 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 SLC35E2P0CK97 266 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CALCBP10092 127 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 HTR2AP28223 471 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CDH5P33151 784 aaPredicted RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 MEOX2P50222 304 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 RND3P61587 244 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 RPL8P62917 257 aaKnown RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 ZNF154Q13106 437 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 QRICH1Q2TAL8 776 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 DCST2Q5T1A1 773 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 MEDAGQ5VYS4 303 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ASPHD2Q6ICH7 369 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 AFTPHQ6ULP2 937 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 CENPUQ71F23 418 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ANKRD37Q7Z713 158 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 OR9A4Q8NGU2 314 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 TADA1Q96BN2 335 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 TMEM80Q96HE8 168 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 VSIG2Q96IQ7 327 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 TSGA13Q96PP4 275 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 SLC30A2Q9BRI3 323 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ZNF416Q9BWM5 594 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 POLR3FQ9H1D9 316 aaPredicted RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 COG4Q9H9E3 785 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 POLD4Q9HCU8 107 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 MIEF1Q9NQG6 463 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 SLC35D1Q9NTN3 355 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 PRR34Q9NV39 138 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 EPS15L1Q9UBC2 864 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 L3MBTL1Q9Y468 752 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ATP6V0A2Q9Y487 856 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 GMPPBQ9Y5P6 360 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 USP16Q9Y5T5 823 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ADGRB3O60242 1522 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 EFCAB6Q5THR3 1501 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 ARHGEF28Q8N1W1 1705 aaKnown RBP2.51□□□□□ -2.01
RFC4-211ENST00000460408 USP6P35125 1406 aa2.51□□□□□ -2.01
RFC4-211ENST00000460408 TET3O43151 1660 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 INO80Q9ULG1 1556 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 CHD2O14647 1828 aaKnown RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 JAK2O60674 1132 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 TRIM3O75382 744 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 STX11O75558 287 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 MBD3O95983 291 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 KRT8P05787 483 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 CD55P08174 381 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 H2AFXP16104 143 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 TNNI3P19429 210 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 GDF1P27539 372 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 LIM2P55344 173 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms