RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ANKRD53Q8N9V6 530 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PIGXQ8TBF5 258 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 C2orf15Q8WU43 125 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 DIO2Q92813 273 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ATOH1Q92858 354 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 C16orf58Q96GQ5 468 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GLIPR2Q9H4G4 154 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 LHX9Q9NQ69 397 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 MED9Q9NWA0 146 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 KLK11Q9UBX7 282 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GMEB2Q9UKD1 530 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ANTXRLA6NF34 631 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 H7C4K7 107 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 AIPO00170 330 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 MAGEB4O15481 346 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PLPP2O43688 288 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 HYAL3O43820 417 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 SELENOFO60613 162 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 SC5DO75845 299 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 EPXP11678 715 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PTHLHP12272 177 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 CBX5P45973 191 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PRLHRP49683 370 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PSMA6P60900 246 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 DYRK1AQ13627 763 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GNA13Q14344 377 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF750Q32MQ0 723 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF311Q5JNZ3 666 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 HENMT1Q5T8I9 393 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 KHDRBS2Q5VWX1 349 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 APOOLQ6UXV4 268 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 C11orf96Q7Z7L8 435 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 OR2T33Q8NG76 320 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 SCARB1Q8WTV0 552 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 SMIM4Q8WVI0 70 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GHSRQ92847 366 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 RGMAQ96B86 450 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 C4orf36Q96KX1 117 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PGLYRP3Q96LB9 341 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ARL6Q9H0F7 186 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 UBQLN3Q9H347 655 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 HPF1Q9NWY4 346 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 CAMK2AQ9UQM7 478 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 AK6Q9Y3D8 172 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 KIF26AQ9ULI4 1882 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CASP8AP2Q9UKL3 1982 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF98A6NK75 572 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 WDPCPO95876 746 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 HMGN2P05204 90 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 ZGLP1P0C6A0 271 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CKBP12277 381 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 C4BPBP20851 252 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FPR3P25089 353 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 S100A11P31949 105 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FRKP42685 505 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF697Q5TEC3 545 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 METTL11BQ5VVY1 283 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FCRLBQ6BAA4 426 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 NIPAL3Q6P499 406 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 SERPINA12Q8IW75 414 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CMTM4Q8IZR5 234 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CMTM8Q8IZV2 173 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 FAM98AQ8NCA5 519 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CLRN3Q8NCR9 226 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR9A1PQ8NGU1 263 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR5J2Q8NH18 312 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR52I2Q8NH67 350 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 LGALS14Q8TCE9 139 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 KAT2AQ92830 837 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 ORAI1Q96D31 301 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 MRPS24Q96EL2 167 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR1F2PQ96R84 312 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 C7orf50Q9BRJ6 194 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 JAM3Q9BX67 310 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 EVA1AQ9H8M9 152 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 NOX3Q9HBY0 568 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 EXOSC3Q9NQT5 275 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 PCDHGA5Q9Y5G8 931 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 A0A1B0GUH1 482 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 OR6C65A6NJZ3 312 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 LINC01387J3KSC0 135 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 RP2O75695 350 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 B3GALNT1O75752 331 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 CLUP10909 449 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 STAT5AP42229 794 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 SEC61A1P61619 476 aaKnown RBP9.59□□□□□ -0.87
CLIP4-208ENST00000456385 DEFA5Q01523 94 aa9.59□□□□□ -0.87
CLIP4-208ENST00000456385 ST3GAL3Q11203 375 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms