RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SLIRPQ9GZT3 109 aaKnown RBP4.53□□□□□ -1.68
RIF1-207ENST00000454583 RMND5AQ9H871 391 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 MEPEQ9NQ76 525 aaPredicted RBP4.53□□□□□ -1.68
RIF1-207ENST00000454583 NXT1Q9UKK6 140 aaKnown RBP4.53□□□□□ -1.68
RIF1-207ENST00000454583 SDK1Q7Z5N4 2213 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FREM3P0C091 2139 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 A0A0G2JMM0 328 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 A0A0G2JPF8 293 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 A0A1W2PPB8 328 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 A0A1W2PRS3 328 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZNF860A6NHJ4 632 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 KIR3DP1A8MWS1 328 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 HNRNPCL2B2RXH8 293 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 HNRNPCL3B7ZW38 293 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 RFXANKO14593 260 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 HCRTR2O43614 444 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 PGM3O95394 542 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 BAG2O95816 211 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 HNRNPCL4P0DMR1 293 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 PSKH1P11801 424 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ABCD3P28288 659 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 UQCRC1P31930 480 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 GSSP48637 474 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ATXN3P54252 364 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 PHEXP78562 749 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 EXOSC7Q15024 291 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 CYP27C1Q4G0S4 372 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CD200R1LQ6Q8B3 271 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 NDUFAF7Q7L592 441 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 GALNT10Q86SR1 603 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 GGNQ86UU5 652 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 RBM45Q8IUH3 476 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 OR4N5Q8IXE1 308 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CCDC116Q8IYX3 515 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 NUP43Q8NFH3 380 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 TOR1AIP2Q8NFQ8 470 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 OR6S1Q8NH40 331 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZBED6CLQ96FA7 236 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 SENP5Q96HI0 755 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 TMEM41AQ96HV5 264 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZNF354BQ96LW1 612 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CNBD2Q96M20 576 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SDHCQ99643 169 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 NXF5Q9H1B4 397 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 AHSPQ9NZD4 102 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 MKLN1Q9UL63 735 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 IGSF10Q6WRI0 2623 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 J3KTA2 159 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 PEX12O00623 359 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SULT1C4O75897 302 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CD63P08962 238 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 COX7A2P14406 83 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 UGT2B10P36537 528 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CCT3P49368 545 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 PNLIPRP2P54317 469 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 RPS26P62854 115 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 CHRNEQ04844 493 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ACSM1Q08AH1 577 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SNTA1Q13424 505 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 TGIF1Q15583 401 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FAM214AQ32MH5 1076 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FAM98BQ52LJ0 330 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 SEZ6L2Q6UXD5 910 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FOXL2NBQ6ZUU3 175 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 TTLL10Q6ZVT0 673 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FAM122BQ7Z309 247 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZDHHC21Q8IVQ6 265 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CMIPQ8IY22 773 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 VWA5B2Q8N398 1253 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CDRT4Q8N9R6 151 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 OR4A15Q8NGL6 344 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 GRHL3Q8TE85 626 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 KISS1RQ969F8 398 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 GFM2Q969S9 779 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 EME1Q96AY2 570 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 HSPBAP1Q96EW2 488 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 PELOQ9BRX2 385 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 PINK1Q9BXM7 581 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ANKRD19PQ9H560 264 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZNF552Q9H707 407 aaPredicted RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 ANKHQ9HCJ1 492 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CDC14AQ9UNH5 594 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 USP24Q9UPU5 2620 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CLDN24A6NM45 220 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 K7EM74 188 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 ZIC3O60481 467 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FABP3P05413 133 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 CYP4B1P13584 511 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 FBLP22087 321 aaKnown RBP4.52□□□□□ -1.69
RIF1-207ENST00000454583 IDUAP35475 653 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SSR2P43308 183 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 NCBP2P52298 156 aaKnown RBP eCLIP4.52□□□□□ -1.69
RIF1-207ENST00000454583 IFITM3Q01628 133 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SPIDRQ14159 915 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 DCST2Q5T1A1 773 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 SLX4IPQ5VYV7 408 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 PGBD2Q6P3X8 592 aa4.52□□□□□ -1.69
RIF1-207ENST00000454583 C6orf15Q6UXA7 325 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms