RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 FAM83FQ8NEG4 500 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 ASB9Q96DX5 294 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 FAM120BQ96EK7 910 aaKnown RBP16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 ADOQ96SZ5 270 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 KCTD14Q9BQ13 255 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 ECSITQ9BQ95 431 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 PRDM14Q9GZV8 571 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 KCNN3Q9UGI6 736 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 A0A087WV62 115 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 OR6C70A6NIJ9 312 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 H0YHG0 523 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 DVL2O14641 736 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 BMP5P22003 454 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 PTGDSP41222 190 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 MC3RP41968 323 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 PSPHP78330 225 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 TXNL4AP83876 142 aaKnown RBP16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 NHSL2Q5HYW2 709 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 SEM1Q6ZVN7 128 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 NET1Q7Z628 596 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 CDH24Q86UP0 819 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 CALHM3Q86XJ0 350 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 OR14L1PQ8NHC6 308 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 LRRC46Q96FV0 321 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 BTBD9Q96Q07 612 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 TRIB1Q96RU8 372 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 FOLH1BQ9HBA9 442 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 C3orf14Q9HBI5 128 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 NTMQ9P121 344 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 OR10H1Q9Y4A9 318 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 CCDC168Q8NDH2 2452 aa16.37■□□□□ 0.21
SQSTM1-204ENST00000453046 EMC8O43402 210 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 PLOD3O60568 738 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 COQ9O75208 318 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 NME6O75414 186 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 CT45A8P0DMV1 189 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 CT45A9P0DMV2 189 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 UQCRC1P31930 480 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 TIMP3P35625 211 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 CCT3P49368 545 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 ZNF155Q12901 538 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 EFR3AQ14156 821 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 CT45A2Q5DJT8 189 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 C1orf146Q5VVC0 180 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 ERICH5Q6P6B1 374 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 TMEM107Q6UX40 140 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 SLC44A2Q8IWA5 706 aaPredicted RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 RNF148Q8N7C7 305 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 OR2T12Q8NG77 320 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 OR7G2Q8NG99 324 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 OR10A6Q8NH74 314 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 OR5AK3PQ8NH89 298 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 NTNG2Q96CW9 530 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 ELP4Q96EB1 424 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 DTNBP1Q96EV8 351 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 SLC35A4Q96G79 324 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 REXO5Q96IC2 774 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 VSTM2LQ96N03 204 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 MS4A4EQ96PG1 132 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 ZCCHC3Q9NUD5 404 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 DDX18Q9NVP1 670 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 PACSIN3Q9UKS6 424 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 POMPQ9Y244 141 aa16.36■□□□□ 0.21
SQSTM1-204ENST00000453046 EXPH5Q8NEV8 1989 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 STAMBPO95630 424 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ACTL6AO96019 429 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 BMP2P12643 396 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 CEACAM8P31997 349 aaPredicted RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ANXA11P50995 505 aaKnown RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 GZMMP51124 257 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 MVDP53602 400 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 MRPS22P82650 360 aaKnown RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 TRAP1Q12931 704 aaKnown RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 TP53BP2Q13625 1128 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 TRIM25Q14258 630 aaKnown RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 RGNQ15493 299 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 CYP51A1Q16850 503 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 DCST1Q5T197 706 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 NSUN5P2Q63ZY6 315 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ENPP6Q6UWR7 440 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ARSKQ6UWY0 536 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 PLCZ1Q86YW0 608 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 OR2L13Q8N349 312 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 WDSUB1Q8N9V3 476 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 NAXEQ8NCW5 288 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 PNPT1Q8TCS8 783 aaKnown RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 EFHD2Q96C19 240 aaPredicted RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 WDYHV1Q96HA8 205 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 SLC35G5Q96KT7 338 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ZNF583Q96ND8 569 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 ZNF629Q9UEG4 869 aaPredicted RBP16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 WIF1Q9Y5W5 379 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 SNX13Q9Y5W8 968 aa16.35■□□□□ 0.21
SQSTM1-204ENST00000453046 KDM4EB2RXH2 506 aaPredicted RBP16.34■□□□□ 0.21
SQSTM1-204ENST00000453046 TSPAN2O60636 221 aa16.34■□□□□ 0.21
SQSTM1-204ENST00000453046 CYP4B1P13584 511 aa16.34■□□□□ 0.21
SQSTM1-204ENST00000453046 TCN1P20061 433 aaPredicted RBP16.34■□□□□ 0.21
SQSTM1-204ENST00000453046 KHKP50053 298 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms