RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DACH2Q96NX9 599 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR10A5Q9H207 317 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 UBQLN3Q9H347 655 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 Q9N2J8 555 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 KRCC1Q9NPI7 259 aaPredicted RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 YARS2Q9Y2Z4 477 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 PCDHGA3Q9Y5H0 932 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 ARID1BQ8NFD5 2236 aaPredicted RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 SOCS6O14544 535 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 SURF4O15260 269 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 RFPL3O75679 317 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 FOSL2P15408 326 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 RPS4Y1P22090 263 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 PSMA1P25786 263 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 CXCL12P48061 93 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 STARD6P59095 220 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 TUBA1BP68363 451 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 EFNB1P98172 346 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 RHAGQ02094 409 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 KLHL12Q53G59 568 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 PLBD1Q6P4A8 553 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 TUBA1AQ71U36 451 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CDK20Q8IZL9 346 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 POGLUT1Q8NBL1 392 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR6C4Q8NGE1 309 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 VSTM2LQ96N03 204 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 TBX5Q99593 518 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 CDX2Q99626 313 aaPredicted RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 IFT27Q9BW83 186 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 WDR12Q9GZL7 423 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 OR8D2Q9GZM6 311 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 WDR70Q9NW82 654 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 FLRT3Q9NZU0 649 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 WNT16Q9UBV4 365 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 LSM2Q9Y333 95 aaKnown RBP10.89□□□□□ -0.67
VTA1-203ENST00000452973 CDH10Q9Y6N8 788 aa10.89□□□□□ -0.67
VTA1-203ENST00000452973 SNTNA6NMZ2 147 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 C17orf105B2RV13 164 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 AK1P00568 194 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 ZGLP1P0C6A0 271 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 OCM2P0CE71 109 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 OCMP0CE72 109 aaPredicted RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 GABRA4P48169 554 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 FOXL2P58012 376 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 CSTF1Q05048 431 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 RGS21Q2M5E4 152 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 C11orf91Q3C1V1 193 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 PROKR2Q8NFJ6 384 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 OR52L1Q8NGH7 329 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TRMT61AQ96FX7 289 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 ART5Q96L15 291 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 RACGAP1Q9H0H5 632 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 POLE4Q9NR33 117 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 CUTCQ9NTM9 273 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TESQ9UGI8 421 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 DAPK2Q9UIK4 370 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 DIMT1Q9UNQ2 313 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 MED31Q9Y3C7 131 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 CLDN16Q9Y5I7 305 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 DMDP11532 3685 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 A0A1B0GWA3 101 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 PRAMEF2O60811 474 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TSPAN19P0C672 248 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TGM4P49221 684 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 CCR4P51679 360 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 AFF3P51826 1226 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 RPS7P62081 194 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 GRM7Q14831 915 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TIMM50Q3ZCQ8 353 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 ALG10BQ5I7T1 473 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 SHISA6Q6ZSJ9 500 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 SLC35F3Q8IY50 421 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 SLC25A45Q8N413 288 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 OR9Q1Q8NGQ5 310 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 C1orf216Q8TAB5 229 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 S100ZQ8WXG8 99 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 TSLPQ969D9 159 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
VTA1-203ENST00000452973 MEPEQ9NQ76 525 aaPredicted RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 HINT3Q9NQE9 182 aaKnown RBP10.88□□□□□ -0.67
VTA1-203ENST00000452973 CDC14CA4D256 554 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 METTL15A6NJ78 407 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 RGS5O15539 181 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 KLF4O43474 513 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 CT45A8P0DMV1 189 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 CT45A9P0DMV2 189 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 GPR3P46089 330 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 SLC9A3P48764 834 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 IFITM3Q01628 133 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 CT45A2Q5DJT8 189 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 VWA2Q5GFL6 755 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 TCTE1Q5JU00 501 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 DCDC5Q6ZRR9 648 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 BMP8AQ7Z5Y6 402 aa10.87□□□□□ -0.67
VTA1-203ENST00000452973 PRR22Q8IZ63 422 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms